Delphinus delphis (saddleback dolphin): 132422774
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Entry
132422774 CDS
T11117
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03082
ATP-dependent chromatin remodeling
ddp04714
Thermogenesis
ddp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132422774 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
132422774 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132422774 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddp03021
]
132422774 (SMARCA4)
03036 Chromosome and associated proteins [BR:
ddp03036
]
132422774 (SMARCA4)
Transcription machinery [BR:
ddp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132422774 (SMARCA4)
Chromosome and associated proteins [BR:
ddp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132422774 (SMARCA4)
Chromatin remodeling factors
BAF complex
132422774 (SMARCA4)
PBAF complex
132422774 (SMARCA4)
GBAF(ncBAF) complex
132422774 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
132422774
NCBI-ProteinID:
XP_059863749
LinkDB
All DBs
Position
3:9101593..9188595
Genome browser
AA seq
1648 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPASGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPPALPVEDKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQ
ALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMG
LGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR
AFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV
APRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETI
LIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGS
EKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKF
ELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTF
NEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVL
RLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHC
STGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLD
RRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDS
LTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKK
QKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYE
LIRKPVDFKKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTS
VRQKIEKEEDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRG
SRAKPVVSDDDSEEEQDEDRSGSGSEED
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttccccgggcccg
ggcccctcccctggagccatgttgggccctagcccaggtccctcacccggctccgcccac
agcatgatggggcccagcccagggcctccctcagcaggacaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcac
gagaagggcatgtcggacgacccccgctacaaccagatgaaggggatggggatgcggtcg
gggggccacgccgggatggggcccccgccaagtcccatggaccagcactcccaaggttac
ccctcgcccctgggtggctccgagcacgcctccagtccggttccagccagcggcccggcc
tcaggcccgcagatgtcgtccgggcctggaggcgccccgctggatggtgctgacccccag
gctttggggcagcagaaccggggcccgaccccctttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggcccgggggcagcccctccctgaccacctg
cagatggcggtgcaggggaagcggccgatgcccgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgcaacaggacctggtcccgggcccgggcccggccccggtcct
ggaccagcacctccaaattacagcaggcctcacggtatgggagggcccaacatgccccct
ccaggaccctcaggtgtgccccccgggatgcccggccagccccctggagggcctcccaag
ccctggcctgaaggacccatggcgaatgctgctgcccccacaagcacacctcagaagctc
atccccccgcagccaacgggtcgcccctcgcctgcgccccccgccgtccctcctgctgcc
tcccccgtgatgccgccccagacacagtcgccagggcagccggcccagcccgcccccatg
gtgccgctgcaccagaagcagagccgcatcacccccatccagaagccgcggggcctggac
cccgtagagatcctgcaggagcgggagtacaggctgcaggctcgcatcgcacaccgaatt
caggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcaaccatt
gagctcaaggccctgaggctgctgaacttccagaggcagctgcggcaggaggtggtggtg
tgcatgaggagggacacggccctcgagacggccctcaacgccaaggcctacaagcgcagt
aagcggcagtccctgcgcgaggcccgcatcactgagaagctggagaagcaacagaagata
gagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattcttcagcac
gccaaggatttcaaagaatatcacaggtcggtcacaggcaaaatccagaaactcacgaag
gcggtggccacataccacgccaacactgagcgggaacagaagaaggagaatgaaagaatc
gagaaggagagaatgcggagactcatggccgaggacgaggaagggtaccgcaagctcatc
gaccagaagaaggacaagcgcctggcctacctcctgcagcagacggatgagtacgtggct
aacctcacggagctggtgcggcagcacaaggccgcccaggtcgccaaggagaagaagaag
aagaagaaaaagaagaaggcagaaaacgctgaaggacagacacctgcaatcggacctgat
ggcgagcctctggatgagaccagccaaatgagcgaccttccggtgaaagtgatccacgtg
gagagtgggaagatcctcacgggcacagacgcacccaaagcagggcagctggaggcctgg
ctggaaatgaacccggggtatgaagtagctccgagatctgatagcgaagagagtggctca
gaagaagaggaggaggaggaggaggaggagcagccacagccagcacagcctcccgccctg
cccgtggaggacaagaagaagattccagatccagacagcgacgacgtctccgaggtggac
gcccggcacatcattgagaacgccaagcaagatgttgatgacgagtatggcgtgtcgcag
gccctcgctcgtggcctgcagtcctattacgccgtggcccacgccgtcaccgagagggtg
gataagcagtcggcgctcatggtcaacggcgtcctcaagcagtaccagatcaaaggcttg
gagtggctggtgtccctgtacaacaacaacctgaatggcatcctggctgatgagatgggc
ctggggaagaccatccagaccatcgctctcatcacgtacctcatggagcacaagcggatc
aacgggcccttcctcatcatagtacctctctcaacgctgtccaactgggcatacgaattt
gacaagtgggccccctcggtggtgaaggtgtcctacaagggctctccagcagccagacgt
gctttcgttccccagctccggagcggcaagttcaacgtcttgctgacgacctacgagtac
atcattaaagacaagcacatccttgcaaagatccgttggaagtacatgatcgtggacgaa
ggccaccgcatgaagaaccaccactgcaagctgacgcaggtcctcaacacgcactacgtg
gccccccgccgcctgctgctgacgggcacgccgctgcagaacaagctccctgagctctgg
gcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgagcagtgg
ttcaacgcgccctttgccatgaccggggaaaaggtggacctgaacgaggaggaaaccatt
ctcatcatccgtcgtctccacaaagtgctgcggcccttcctgctccggcggctcaagaag
gaagtcgaggctcagttacctgaaaaggtggagtacgtcatcaagtgcgacatgtccgcg
ctgcagcgcgtgctttaccggcacatgcaggccaagggggtgctgctcaccgatggctct
gaaaaggataagaagggcaaaggtggcaccaagaccctgatgaacaccatcatgcagctg
aggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttttccgagcac
ttgggatttaccggtggcatcgtccaagggctggacctgtaccgagcctcggggaaattt
gagctgctcgatagaattcttcccaaactccgggccaccaaccataaagtgctgctgttc
tgtcagatgacctccctcatgacgatcatggaagactattttgcgtatcgcggctttaaa
tacctcaggctcgatggaaccactaaagcggaggaccggggcatgctgctgaagaccttc
aacgagcccggctccgagtacttcatcttcctgctcagcacccgggctggggggctgggt
ctgaaccttcagtcagccgacactgttatcatattcgacagtgactggaacccccaccag
gacctgcaagcgcaggaccgtgcccaccgcatcgggcagcagaacgaggtgcgtgtgctc
cgcctctgcacggtcaacagcgtggaagagaagatcctggctgcggccaagtacaagctc
aacgtcgaccagaaggtgatccaggccggcatgttcgaccagaagtcctccagccacgag
aggcgcgctttcctccaggccatcctcgagcacgaggagcaggacgagagcagacactgc
agcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggcgtcaac
cccgacttggaggagccacctctaaaggaagaagacgaggtgcctgacgacgagacggtg
aaccagatgattgcccggcacgaggaagagttcgacctgttcatgcgcatggacctggac
cgcaggcgtgaggaggcccgcaaccccaagcggaagccacgcctgatggaggaggatgag
ctcccctcgtggatcatcaaggacgacgcagaggtggagcggctgacatgcgaggaggag
gaggagaagatgttcggccgcggctcccgccatcgcaaggaggtggactacagcgactcg
ctgaccgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctggaggag
atcgaagaggaggtccggcagaagaaatcatcgcggaagcggaagagggacagcgatgcc
ggcccctccaccccgaccaccagcacccgcagccgcgacaaggacgacgagagcaagaag
cagaagaagcgtggccggccgcctgccgagaagctctcccccaacccgcccaacctcacc
aagaagatgaagaagatcgtggacgctgtgatcaagtacaaggacagtagtagtggacgt
cagctcagcgaggtgttcatccagctgccgtcccgcaaggagctgcctgagtactacgag
ctcatccgcaagcctgtggacttcaagaagataaaggagcgcatccgcagccacaagtac
cgcagcctcaacgacctagagaaggacgtgatgctgctgtgccagaacgcgcagaccttc
aacctggagggctccctgatctacgaagactccatcgtcctccagtcggtcttcaccagc
gtgcggcagaaaatcgagaaggaggaagacagtgaaggggaggagagtgaggaggaagag
gagggcgaggaggaaggctcggagtcggagtctcgctcagtcaaagtgaagatcaagctg
ggccggaaggagaaggcccaggaccggctcaagggcggccggcggcggccgagccgtggc
tccagggccaagccggtggtgagcgacgacgacagtgaggaggagcaggacgaggaccgc
tcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
