Delphinus delphis (saddleback dolphin): 132423299
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Entry
132423299 CDS
T11117
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03440
Homologous recombination
ddp03450
Non-homologous end-joining
ddp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132423299 (RAD50)
03450 Non-homologous end-joining
132423299 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
132423299 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddp03032
]
132423299 (RAD50)
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132423299 (RAD50)
DNA replication proteins [BR:
ddp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132423299 (RAD50)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132423299 (RAD50)
BRCA1-C complex
132423299 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
132423299 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
132423299
NCBI-ProteinID:
XP_059864855
LinkDB
All DBs
Position
3:complement(63428839..63664631)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIVECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACDIRDQITRKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNETKALDSRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVECQRELEKLNKESRLLNEEKSELLVEQGRLQLQADRH
QEHMRARDSLIQSLATQLELDGFKHGPFNERQIKNFHKLVRERQEKEAETARQLMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQSELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTATRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEKLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDEHQSCCPVCQRVFQTEAELQEVINDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIIP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDFDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQVNPLETTLEKYQQEKEELINKKNTSNKIAQDKINDIKEKVKNIHGYVKD
IENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERQQHLKEMGQMQVLQMKNEHQKLEEKIENIKRNLGSAIGRQEG
YEEEIIRFKKELRDPQFWDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTPLDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSISSLGSNVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggataaa
gataaacaaattatcacattcttcagtcccctcacaattttggttggacccaatggggcg
gggaaaacgaccatcgttgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacattcgttcatgatcccaaggttgctcaagaaacagatgttagagca
cagattcgtctgcagtttcgtgatgtcaatggagaacttgtagctgtgcagagatctatg
gtttgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggcgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gagtctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgagattttt
tccgcaacaaggtacattaaagcgttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaataaggaaaaagct
tgtgatattcgcgatcagattactcgtaaggaagcgcagttaacatcgtcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaactaaagctttggatagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggtct
gatgagcagctaaatgatttatatcacaatcaccagagaacagttagggagaaagaaagg
agactggtagaatgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
gaagaaaaatcagaactacttgttgaacagggtcgtctgcagctacaagcagatcgtcat
caagaacatatgcgagctagagattcattaattcagtctttggcaacacaactagaattg
gatggctttaagcatggaccattcaatgagagacagataaaaaattttcacaaacttgtg
agagagaggcaagaaaaggaagcagaaaccgccaggcaactgatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataatagagctaaaatcagaaatcctaactaagaagcagagtgagctgaaaaatgtg
aagtatgaattacagcagttggaaggatcttcagacagaattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaagctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagatctagacaggaccctgcgtaaa
ttggaccaggagatggagcagttaaatcatcatacagcaacacgtacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaggaa
ctggcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaggaaggaagag
aagttgtccagctatgaagacaaactgtttgatgtttgtggtagccaggattttgaaagt
gacttagacaggcttaaagaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagctacggcagtttactcccaattcattactcagctaacggatgaacaccagtcgtgt
tgccctgtctgtcagagagtttttcagacagaagctgaattacaagaagtcatcaatgat
ttgcagtctaagctgaggcttgctccagataagctcaagtcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactagtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtgaacagagac
atacagcgcctaaagaatgacatagaagaacaggaaacacttttgggtacaattatacct
gaggaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggttccagatg
gaacttaaggatgttgaaagaaaaattgcacaacaagcagctaaactccaaggactagat
ttcgatagaactgttcaacaagtaaaccaggaaaaacaagaaaagcaacacaaattagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacaaatt
cagcacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttatacagagaaataaaggatgctaaagagcaggtaaaccctttggaaacaacattggaa
aagtaccagcaggagaaagaagaattaatcaacaaaaaaaatacaagcaacaaaatagca
caggataaaataaatgatatcaaagagaaggttaaaaatattcatggttatgtgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaaggaatgaagaactaaaagaagttgaagaagaaagacaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagaaaatataaaaagaaatctcggttcggcaatagggcgacaggaaggt
tatgaggaagaaattattcgttttaagaaagaacttcgagaccctcaattttgggatgcc
gaggaaaagtatagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcgatctgacgccgatgaaaatgtatcagcttctgataaaaggcgg
aattacaactaccgagtggtgatgctaaagggagacacgcccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcctcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcatccttgctttggatgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtgatcactcatgatgaagattttgtggagctcttagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagatcgtg
aaatgcagtattagttccctaggatctaatgttcattaa
DBGET
integrated database retrieval system
