Delphinus delphis (saddleback dolphin): 132426024
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Entry
132426024 CDS
T11117
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03030
DNA replication
ddp03410
Base excision repair
ddp03420
Nucleotide excision repair
ddp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132426024 (RFC1)
03410 Base excision repair
132426024 (RFC1)
03420 Nucleotide excision repair
132426024 (RFC1)
03430 Mismatch repair
132426024 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddp03032
]
132426024 (RFC1)
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132426024 (RFC1)
DNA replication proteins [BR:
ddp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132426024 (RFC1)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132426024 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
AAA_14
BRCT_2
RuvB_N
AAA_5
AAA_33
AAA_7
AAA_30
AAA_16
AAA_18
nSTAND3
Zeta_toxin
AAA_17
RNA_helicase
AAA_19
NTPase_1
AAA_28
Motif
Other DBs
NCBI-GeneID:
132426024
NCBI-ProteinID:
XP_059868670
LinkDB
All DBs
Position
5:75710790..75793485
Genome browser
AA seq
1146 aa
AA seq
DB search
MDIRKFFGVIPSGKKVVSETAKKNEKTKSAEETRKAKKGIKEIKVNRSCKEDDFKQKQPN
KKKRIIYDSDSESEETVQVKNSKKRPEKLPLSSKPAKIRHQDPVTYISETDEEDDFVCKK
AASKSKENGGSPNSYLGASNMKKNEENTKTLNTKNKPLSPMKLTPTSVLDYFGTASVQRS
AKKMVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLALLDEEPK
TKKAQKDPGERETFSSVQASLCKAEKPKYPHKEQFSDDRKNCSPKKQTKCESSKESQQHS
RSSTHKIGETSSPKTSSKLAPLKKKEESSNKETEPMASKRKENAIELKETRTPKKIKSSP
AKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT
MPGKKSKYEIAAEAEMKKEKSKLERTPQKNDQGKRRISPTKKESESKKCRLTPKKQSSIK
SIKKETSMFQRGLDFKEQVAEETNGDSWARNLADDSSENKVENLLWVDKYKPSSLKTIIG
QQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGAAHSVGTKHALIMD
EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMMSVAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSLRA
KKDIKLGPFDVARKVFVTGEETAHMSLVDKLDLFFYDYSIAPLFVQENYIHVKPVAAGGD
MKKHLMLLSRAADSISDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFP
SWLGKHSSMGKHDRIVQDLALHMSLRTYSSKKTVNVDYLSHIRDALVQPLTSQGIEGVQD
VVALMDAYYLMKEDFENIMEISSWGDRPSPFSKLDPKVKAAFTRAYNKEVHLIPYSLQAV
KTHRHSTGPALDAEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKTSKSEKESRKGK
GKSSKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttataccaagtggaaagaaagttgtaagtgaaaca
gcaaagaagaatgagaaaacgaagtctgctgaagaaaccagaaaagcgaagaaaggaata
aaggaaatcaaggtaaatcgttcttgtaaagaagatgacttcaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aactccaaaaagcgaccagaaaaattgccactgtcttctaaacctgctaaaattcgacac
caggatcctgttacatacatttcagaaacagatgaagaagatgactttgtgtgtaagaag
gcagcctctaaatcaaaagagaatggaggatctccaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaagacactaaacactaagaataagcctttgtcacca
atgaagcttacccccacatcagtgcttgattattttggaactgcaagtgtccaaagatcg
gctaagaagatggtggcaagcaaaagaaaagagccttcacaaaatgcagatgattccaga
ttaaatgatgaagccatcgccaagcaattgcaacttgatgaagatgcagagctagagaga
caactgcatgaagatgaagagtttgccagaacattagccttgttggatgaagaacccaag
accaaaaaggctcaaaaggacccaggagagagagagacgttttcatctgtgcaagccagt
ttatgtaaagcagaaaaacctaaatatcctcataaagaacaattttcagatgacagaaag
aactgcagtcctaagaagcaaactaaatgtgaaagttcaaaagaatctcagcaacattcc
aggtcatccactcataaaataggagaaacttcttctccaaaaaccagttccaagctggca
ccactgaaaaaaaaagaagaaagttctaataaagaaacagagcctatggcctcaaaaaga
aaagaaaatgccattgagttgaaagagacaagaactcctaagaaaatcaaaagttctcca
gctaaaaaagagtctataagtcctgaagattctgaaaagagacgaactaattatcaagct
tatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagagataccaaag
ggagctgaaaattgcttggaaggccttacgtttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggtcagtccaagagtgataag
gcagcagccttgggaacaaaaattattgatgaagatggcctattgaatctgattcgaact
atgccaggcaagaagtccaagtatgaaatagcagctgaagctgagatgaagaaagaaaaa
tccaaattggaaagaacaccccaaaaaaatgaccaaggaaaaagaagaattagtccaact
aagaaggaatcagaatctaaaaagtgcagactgactcccaaaaagcaaagctctataaag
tcaataaaaaaggaaacaagtatgtttcagagaggcctggacttcaaggagcaggtggct
gaggaaacaaatggtgacagctgggctaggaatttggctgatgacagcagtgaaaacaaa
gtggagaatttgctctgggtggataaatataagccatcctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctgcgctggctccaaaactggcacaag
agtccgtccgaagataagaaacatgcagcaaagtttggtaaatttgctggcaaagatgat
ggctccagttttaaagctgcattgctctcaggccctcccggtgttggcaaaacaaccaca
gcttctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgacact
cggagtaagaacagtttgaaggagattgttgctgaatcgctgaataataccagcatcaaa
ggcttttattcaagtggagcagcccattcagtaggcacgaaacatgctctcatcatggat
gaagtagatggcatggccggcaatgaggacaggggaggaattcaggaattaattggcctg
ataaaacatacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgatctttggttcattattgttttgatcttcgttttcaaagacctcgggttgaacaaatt
aagggtgctatgatgtctgttgcatttaaagagggtttaaagatcccccctccagctatg
aatgaaataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatg
tggtgtgcacgaagtaaagcactaacctatgaccaggctaaggctgattctcttagagcc
aaaaaggatatcaaattgggcccatttgatgttgcccggaaagtgtttgtaactggagag
gagactgctcatatgtcacttgtggacaaattagatctctttttttatgattattcaata
gcacccctctttgtccaggagaactacatacatgtgaagcctgtagccgcagggggtgac
atgaaaaagcacttgatgcttttaagcagagcagcagacagcatatctgatggtgaccta
gtggaccgtcagatccggaataagcaaaactggagtcttctgcccacacaggccatttat
gccagtgttcttcctggagagttaatgagggggtacatgacccagtttcctaccttccca
agttggttggggaagcactcatctatgggcaaacacgatcgtattgttcaggacctagca
ttgcatatgagtctcagaacttactccagcaaaaagactgtaaatgtggattatctgtcg
catataagggatgcacttgtacagcccttgacctcacaagggatagaaggagtacaggat
gttgttgctcttatggacgcgtattatttgatgaaagaagactttgagaatatcatggaa
attagcagctggggagacagacctagtcccttctccaagctggatcccaaggtgaaagca
gccttcacgagagcttacaataaggaagtccaccttattccgtattcactccaggcagta
aagacacacagacacagcacaggcccagcgctggatgctgaatacaatgaagagttaaat
gaagatgactctcaatctgatgagaaagaccaggacactttggaaactgatgctatgatc
aagaaaaagacaaaatcttcaaagacttcaaaatcagaaaaagagtccagaaaaggaaaa
ggaaaaagttcaaagaaataa
DBGET
integrated database retrieval system
