Delphinus delphis (saddleback dolphin): 132427482
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Entry
132427482 CDS
T11117
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1
KO
K06225
patched 1
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04024
cAMP signaling pathway
ddp04340
Hedgehog signaling pathway
ddp04360
Axon guidance
ddp05200
Pathways in cancer
ddp05205
Proteoglycans in cancer
ddp05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132427482 (PTCH1)
04024 cAMP signaling pathway
132427482 (PTCH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
132427482 (PTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132427482 (PTCH1)
05205 Proteoglycans in cancer
132427482 (PTCH1)
09162 Cancer: specific types
05217 Basal cell carcinoma
132427482 (PTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
132427482
NCBI-ProteinID:
XP_059870986
LinkDB
All DBs
Position
6:complement(86428273..86484645)
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AA seq
1447 aa
AA seq
DB search
MASAGNAAEPQDRGGGGSCSGTPGRPAGGGRRRRTGGLRRNAAPDWDYLHRPSYCDAAFA
LEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANL
ETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEDGANVLTTEALRQHLDS
ALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKL
QSGTAYLLGKPPLQWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPAD
PDCPATAPNKNATKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQ
TMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLS
FTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSV
AAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL
KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLY
RREDRRLDIFCCFTSPCVSRVIQVEPQAYTETHNNTRYSPPPPYSSHSFAHETQITMQST
VQLRTEYDPHTHVYYTTAEPRSEISVQPVTVAQDTLSCQSPESTSSTRDLLSQFSDSSLH
CLEPPCSRWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIV
PRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLP
KMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQ
LTKRRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRL
RIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQY
IGLRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAV
PVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAMLALEHMFAPVLDGAVSTLLGVLMLA
GSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPP
PSVVRFALPPGHTNNGSDSSDSEYSSQTTVSGISEELRHYEAQQGAGGPSHQVIVEATEN
PVFARSTVVHPEPRQHPPSNPRQQPHLDSGSLPPGRPGQQPRREAPRECLRPPPYRPRRD
AFEISTEGHSGPSNRDRTGPRGTRSHNPRHPAFTATGSSVPSYCQPITTVTASASVTVAV
HPPPGPSRNPRGGLRPGYEDYPETDHGLFEDPHVPFNVRCERRDPKVEVIELQDVECEER
RRGSSSN
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctggtaacgctgccgagccccaggaccgcggcggcggcggcagctgcagc
gggaccccgggccggccggccggtggcgggaggcgcagaaggaccggggggctgcgccgc
aacgccgcgccggactgggactatctgcaccggcccagctactgcgacgccgccttcgct
ctggagcagatttccaaggggaaagctactggccggaaagcgccgctgtggctgagagcg
aagtttcagagactcctatttaaactgggttgttacattcaaaaaaactgcggcaagttc
ttggttgtaggcctcctcatatttggggccttcgctgtgggattaaaggcagctaatctc
gagaccaacgtggaggagctgtgggtggaagttggtgggcgagttagtcgtgaattaaat
tacactcgccagaagattggagaagaggctatgtttaatcctcaactcatgattcagacc
cccaaggaagacggtgctaatgtcctgaccacggaggcactccgacagcacctggactcg
gcgctccaggccagccgggtccatgtatatatgtataacaggcaatggaaattggaacat
ttgtgttataaatctggagaacttatcacagaaacaggttacatggatcagataatagaa
tatctttacccttgtttaattattacacctttggactgcttctgggaaggggcgaagtta
cagtctgggacagcatacctactaggtaagcctcctttgcagtggacaaactttgaccct
ttggaattcctagaagagttaaagaaaataaactatcaagtggacagctgggaggaaatg
ctgaataaggctgaagttggtcatggttacatggaccggccctgcctcaatccggctgat
ccagactgccctgccacagcccccaacaaaaatgcaaccaaacctcttgatatggccctt
gttttgaatggtgggtgtcatggattatccagaaagtatatgcactggcaggaggaactg
attgtgggtggcacagtcaagaacagcactggaaagcttgtcagcgcccacgccttgcag
accatgtttcagttaatgactcccaagcaaatgtacgaacacttcaagggttatgagtat
gtctcgcacatcaactggaacgaggacaaggcagcagccatcctggaggcttggcagagg
acgtatgtggaggtagttcatcaaagcgtcgctcagaactccactcagaaggtgctttcc
tttaccacgacgaccctggacgacatcctcaagtccttctctgatgtcagcgtcatccga
gtggccagtggctatttactgatgcttgcctatgcctgtttaaccatgctgcgctgggac
tgctccaagtcccagggtgccgtggggctggctggtgtcctgttggttgcactgtcagtg
gctgcaggattgggcctgtgctcattgatcgggatttcctttaatgctgcaacaactcag
gttttgccatttcttgctcttggcgttggtgtggatgatgtcttccttctggcgcatgca
tttagtgaaacgggacagaataaaagaatcccttttgaggacaggaccggggagtgtctc
aagcgcacgggagccagcgtggcccttacatccatcagcaacgtcacagccttcttcatg
gctgcgttgatcccgattcccgctctgcgggcgttctccctgcaggcggctgtagtggtg
gtattcaattttgctatggttctgctgatttttcctgcaattctcagcatggatttgtat
cgacgtgaggacaggagattggatattttctgctgttttacaagcccctgtgtcagcaga
gtgattcaggttgaaccccaggcctacacagagactcacaataacacccgctacagcccc
ccgcccccctacagcagccacagcttcgcccacgaaacccagatcaccatgcagtccacg
gtgcagcttcgcacagagtacgacccacacacgcacgtgtactacaccactgccgagccg
cgctccgagatctccgtgcaacccgtcaccgtggcccaggacacgctcagctgccagagc
cccgagagcaccagctccacgagggacctgctctcccagttctctgactctagcctccac
tgccttgagcccccctgcagcaggtggacactctcatcttttgccgagaagcactatgcc
cctttcctcttgaaaccaaaagccaaggtcgtggtgatcttccttttcctgggcctgctg
ggggtcagcctttatgggaccacccgagtgcgtgatgggctggaccttacagacattgtg
cctcgggaaactagagaatatgactttattgctgcacagttcaaatacttctctttctac
aacatgtatatagtcactcagaaggcagactaccccaatatccagcacttactttacgac
cttcataagagtttcagtaatgtgaagtatgtcatgttggaagaaaataaacagcttccc
aaaatgtggcttcactacttcagagactggctccaaggacttcaggatgcatttgacagt
gactgggaaactgggaaaatcatgccaaacaattacaaaaatggatcagatgacggggtc
cttgcctacaaactcctggtgcaaaccggcagccgtgataagcccatcgacatcagccag
ctcactaaacggcgcctggtggatgcagacggcatcattaatcccaacgctttctacatc
tacctgaccgcttgggtcagcaacgaccccgtggcttacgccgcctcccaagccaacatc
cggcctcaccgtcctgagtgggtccacgacaaagccgactacatgccagaaaccaggctg
agaatcccagcagcagagcccatcgaatacgctcagttccctttctacctcaacggcttg
cgtgacacctcagacttcgttgaagcaattgaaaaagtcagaacgatctgcaacaactac
acaagcctggggctctccagctaccccaacggctaccccttcctcttctgggagcagtac
atcggcctccgccactggctcctcctgtccatcagcgtggtgctggcctgcacgttcctc
gtgtgtgctgtcttcctcctgaacccctggacggccgggatcattgtgacagtcttggct
ttgatgacggtcgagctctttggcatgatgggcctcattggaatcaagctgagtgccgtg
cctgtggtcatcttgatcgcttccgtcggcattggagtggagttcaccgttcatgttgct
ctggcctttctaacagccattggcgataagaaccgcagggccatgctcgccctggagcac
atgtttgcacccgttctggacggtgccgtttccactctgttaggagtgctgatgcttgcg
ggatccgagtttgatttcattgtcaggtatttctttgctgtcctggcaatcctaacaatc
ctgggtgttctcaatggactggttttgctgccagtccttttgtccttcttcggaccgtat
cctgaggtgtctccagccaacgggctgaaccggctgcccaccccttcccctgagccgccc
cccagtgtggtccggttcgctctgccccctggtcacacgaacaacgggtctgattcctct
gactcggagtacagttctcagacgacggtgtcgggcatcagtgaggagcttcggcactac
gaggcccagcagggcgccgggggcccttcccaccaagtgatcgtggaggccacagagaac
cctgtcttcgcccgctccaccgtggtccatcctgaaccgaggcagcacccaccctccaac
cctcgacagcagccccatctggactcagggtccctgccacccggacggccaggccagcag
cccagaagagaggcccccagagaatgcttgaggccgcccccttacagaccgcgcagagac
gctttcgaaatttctactgaagggcattctggccctagcaatagggaccgcacgggcccc
cggggaacccgttctcacaaccctcggcacccagcgttcactgccacgggcagctccgtg
cccagctactgccagcccatcaccaccgtgacggcctcagcgtccgtgactgttgcagtg
caccccccgcccgggcccagtcggaacccccgagggggacttcgcccgggctacgaggac
taccccgagactgaccacgggctgtttgaggacccccatgtgccttttaacgtccgttgc
gagaggagggatcccaaggtggaggtcattgagctacaggacgtggaatgtgaggagagg
cgccggggcagcagctccaactga
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integrated database retrieval system
