Delphinus delphis (saddleback dolphin): 132427738
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Entry
132427738 CDS
T11117
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132427738
Enzymes [BR:
ddp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132427738
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132427738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Abhydrolase_11
Motif
Other DBs
NCBI-GeneID:
132427738
NCBI-ProteinID:
XP_059871365
LinkDB
All DBs
Position
6:113663988..113743430
Genome browser
AA seq
1713 aa
AA seq
DB search
MGLEKYLKLLEKMSQLILDQMAKADYDSLLNDFVESEFFLIDGDSLLMTYICEKSLRPEQ
GLHFFYLVECYLVDLINKGGQFAVVFFKDAEHAYNSIPELLPLRMALILHLQHNTNIDVR
TGFSGCFSQEWKSFLEDSYPYFLIVADESLSHLQVHLFNFLIMQSWAMNVNAVLFSGQAS
DVLRLYAYFMPSNYEHQLIFQKREKHFENAYKTLIKQLKECRVLALGRLFGNLKWKDMME
EACETISLLKQLWPEGSDIRQVLCVTSCSLSLSLYHHFLENRSKTTDAQKANIQQVETNC
PTLEGVTDWCRLHCLSVAFLLHLPLSQRACTRFITSRWIKDIQTFLTMKKWCEYFILSNI
DVFEFWNLDLTHLSDLSDELLLKNIAFYYENESVQGLHLNLGNGIMKDYEHLWDTVSKLV
TKFDVGKPFPLRTEQFPFLKKDPSPIKDTSKEKMANLGFIPVSCQVVDKFAGDLLKDLPF
LTSDDPIVTSLVKQKEFDELVHWHSHRPLSDDYDRTKGQFDEKSRDPRHLRSVQMYHRFQ
RFYGKSLESVSSKFVVPQAIKPRKNFCEPKSKKIQETKAEKITRENKERLFAKEEEKEEK
KWNVLSFSIEEEMKENLNSGIKNLEDFLKSCKTSPVKFRVEMVGITACLRAWKEHCRGEG
ETTKDLSIAVQMMKRIYSVMEKYPELLQEADRQLIARCLRYLGFEELASTLHPAQVTEND
MKEKKKNKYSVGIGPARFQLQYMGQYLVRDERKDPDPRVQDFIPDTWQRELLDVVDKNES
AVIVAPTSSGKTYASYYCIEKVLREGDDGVVVYVAPTKALVNQVAATVENRFSKNLPNGV
SLCGVFTRDYRHEALNSQVLITVPACLELLLLAPHRQAWVKRIRYVIFDEVHCLGGEIGA
EVWEHLLVMIRCPFLALSATISNPEHLTEWLRSIKQYWKQTDSMIEKNTASSRNAGCRAS
SHQDYLLRKQSYKVRLVLYAERYNDLEKHICSVNNHDISFDHFHPCAALTMDHIEKFGFP
SDLTFSPREMIQLYDTMFEFWEGWPRAQELCPEEFVHFKNKIVIRKVDARKYEESLKAEL
TGWVKSGHIQEARMVLRNLRPPSVVSSENMARRMFPRLVEKLRQMEKLPALFFLFNLGAV
ERSAGSVKRFLEIKQQSRRSLKADKEAYDMESKLRKVRKSLETQKTIDKRSQTNPRKMDQ
SLILEAEHANLLKLLEKNLEIPEDCTYADQKAIDAETLQRVFDRVKFSRKGAELKALAAR
GIGYHHSSLSFKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSVYLDALNY
RQMSGRAGRRGQDLGGDVYFFGIPLPKIEKLIKSNVPELRGQFPLSISLILRLMLLASKA
DDPEDAKAKVLSVLKHSLISFKQPRALEMLKLYFLFSVQFLVKEGYLDQEGNPTGFAGLV
SHLHYHEPSNLVFVSFLVRGLFHNLCQPTRKGSKHFSQDVMEKLVLVLANLFGRKYLPAK
FQDATLKFYQSKVFLEDLPEDFKAALDEYNTNVTKDFASFLLIVSKLADMKQEHQLPLSK
IDFSGQECEDSQLVSHLMSCREGRIAISPFACLSGNSDGSLLHLETSDHVTLRTIGIDST
RAPVLWPQEFDHQGRRMQLNAYALDFYKHGSLTGLVQDNRINEGAAYQLLEDFSLTIKSI
SVSLRELCGNEEDNVVLAFEQLSETFNEKFKKI
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagaaaagtacctgaagcttttggagaaaatgtcacagttgattttggatcaa
atggcaaaagctgattatgacagtctgttgaatgattttgttgagtctgagttttttctg
attgatggagactcactgctgatgacatacatctgtgagaaatccttgcggcctgaacag
ggcctgcacttcttttacctggtggaatgctaccttgtggatctaattaataaaggagga
cagtttgccgtcgtcttcttcaaggatgctgaacatgcatacaacagcatccctgaattg
cttcctctgagaatggcgttaattctccaccttcagcataataccaacattgatgtccga
acaggcttttctgggtgcttctcacaagagtggaaaagtttcttggaagacagttaccca
tattttctgatcgttgccgatgaaagcctgagccatctacaagtacaccttttcaacttt
ttaatcatgcagtcctgggcgatgaatgtcaatgccgtgctcttctcgggccaagcatcc
gatgtccttcgactttacgcgtactttatgccgagcaactacgaacaccagttgattttc
cagaagcgtgaaaagcactttgagaatgcttataaaaccctgattaagcaattgaaggaa
tgtagagttttagcattaggacgtctttttggaaatttaaaatggaaagatatgatggaa
gaggcatgtgaaactatttctctgcttaagcaactgtggccagaaggatctgacattcgg
caagttctttgtgttacttcgtgctccttgtctttgagtttataccatcactttttagaa
aacagatcgaagaccactgatgctcagaaagctaacatccaacaggtggagacgaactgc
cccaccctggagggagtgacagattggtgtagactgcactgtctcagcgtggcatttctc
ctccacttacctctttcccaaagagcatgtaccagattcatcacttcccgctggattaag
gacattcagactttcttaacaatgaaaaagtggtgtgaatacttcatcctaagtaatata
gacgtttttgaattttggaatctggatttaactcacctttccgacttaagtgatgagctt
ttattgaagaatatagcattttactatgaaaatgaaagtgttcaagggctacatttgaat
ttgggaaatggcattatgaaagattatgaacatctctgggatactgtatcaaagttggtc
acaaagtttgatgttggaaagccatttcctctgagaacagaacaatttccttttcttaaa
aaggatccatcaccaatcaaagatacctccaaggaaaagatggctaatttgggttttatt
ccagtgtcatgtcaggtggttgataagtttgctggggaccttttgaaagatttgcctttc
ctaacgagcgatgatcctattgtaacttcactggtcaagcagaaagaatttgatgagctt
gtgcactggcattcccacagaccccttagtgatgattatgacaggacaaagggtcagttt
gatgaaaaatctagagatcctcgtcatcttagatctgtgcaaatgtatcatcgttttcaa
cgattttatgggaagtcattagaatcggtctcttcaaaatttgttgtacctcaagctatc
aagccaaggaagaatttctgtgaacccaagagcaaaaagatacaggagaccaaggctgaa
aaaattactagagagaataaggagaggctgtttgccaaggaagaagaaaaagaagagaaa
aaatggaatgttctgtccttttctattgaggaggaaatgaaagagaatttaaactctgga
ataaagaacctagaagattttttgaaatcatgtaaaactagcccagtgaaatttcgagtt
gaaatggtggggattactgcctgcttgagagcgtggaaagagcattgccgtggtgaaggt
gaaaccacaaaagatttaagtatagctgttcaaatgatgaaaaggatctactccgtgatg
gaaaaatacccagaacttttgcaagaggcagatcggcaactcatagccagatgccttagg
tacttaggatttgaggagttggcaagtactttgcatccagcgcaggtcacagaaaatgac
atgaaggagaagaagaagaataaatactcagttggcattgggccggctcggtttcagctg
cagtacatgggccagtatttggtacgagatgagaggaaagatccagaccccagagtccag
gactttattcctgacacctggcagcgagagctcttggacgtcgtggacaagaatgagtct
gcggtcatagtggcccccacgtcctcagggaagacctacgcctcctactactgcatagag
aaggtgctacgggagggcgacgatggggtggtcgtgtacgtggcccccaccaaggccctt
gtcaatcaggtggcagcaactgttgagaatcgttttagcaaaaatctgccaaacggtgta
tctctgtgcggtgtttttacacgggactatcgtcatgaggctctaaactcccaggtactt
atcacagtgcctgcctgccttgaacttctgctgctagctccgcatcgccaggcatgggtg
aaaaggatcagatatgttatatttgatgaggtccactgtcttggtggagaaattggagca
gaagtctgggagcatctccttgtcatgatccgctgtcccttcctggccctttctgctacc
attagcaacccggagcatctcaccgagtggctacgatccataaaacagtactggaaacaa
acggacagtatgatagaaaaaaatactgcttcttcaagaaatgccggctgccgcgccagt
tctcaccaagactacttactgaggaagcagtcgtataaagtgagacttgtgctctatgca
gagagatacaatgatttagagaagcacatatgttcagtaaacaatcatgacatctccttt
gaccattttcacccgtgcgctgcgctgaccatggaccatattgaaaagtttggattccct
tctgatcttaccttttcgcctcgagaaatgatccaactttatgataccatgtttgaattc
tgggaaggttggcccagggctcaggagttgtgtccggaggaattcgttcattttaagaat
aaaatagtcattcgaaaggtggatgctagaaagtatgaagagagcttaaaggcagaactg
acgggctgggtgaagagcggtcacatccaggaggccagaatggtcctgaggaatcttcgt
cctccttcggttgttagttcagaaaacatggcacgacgtatgtttccacgtcttgttgaa
aagctaagacaaatggagaagttacctgcactgttttttttatttaatttaggggctgta
gagagaagcgctggaagtgtgaaaaggttcctagagataaagcaacagagcagaaggtcc
ctcaaggctgataaggaggcctatgacatggagagcaaacttcgaaaagttagaaaatcc
cttgagacacagaagacaatagataaaagaagccagacaaatcccagaaaaatggatcaa
agcctaatccttgaagctgaacatgctaatctcctcaagcttcttgagaagaacttggag
atccctgaggactgcacatatgctgatcagaaggccatagatgctgagactttgcagagg
gtgtttgaccgagtgaaattctcaaggaaaggcgccgaactgaaggctttggcagcaaga
gggattggatatcatcacagctctttgagcttcaaagaaaagcagttagttgagattctt
tttaggaaaggatttattagggtggtgaccgctacggggacacttgctttaggaatcaac
atgccttgtaaatctgtggtttttgctcaaaactcagtctatctggatgctttaaactac
agacagatgtctggacgggccggacgacgaggtcaagacctggggggagatgtgtatttc
tttggtattccactccctaaaatcgaaaagctcatcaaatccaacgtccctgaactgaga
gggcagttccctctcagcatctccctgatcctgagactcatgcttctggcttccaaggca
gatgaccccgaggacgctaaggcaaaggtgctgtcggtgctcaagcactcactgatctcc
ttcaagcagccccgggcgctggagatgctgaaactgtactttctgttctccgtgcaattc
ctggtcaaggagggctatttagatcaagaaggtaatcctacaggctttgctggacttgtg
tcacatttgcattatcacgagccttccaatcttgttttcgtcagttttcttgtaagaggc
cttttccataatctctgtcagccaaccaggaaaggctcgaaacatttttctcaagatgtt
atggaaaagctagtgttagtattggcaaatctgtttggcagaaaatatcttccagcaaag
ttccaagatgctacgctcaagttttatcaatccaaggtgtttctggaggatctccctgag
gacttcaaggccgctctagatgagtataacacaaacgtgacaaaggactttgcctctttc
ctactgattgtttccaaactggctgatatgaaacaagaacatcagctcccattgtcaaaa
atagatttctcaggtcaagagtgtgaagactcacaacttgtgtctcacttgatgagctgc
agggaaggaagaatagccatttctccatttgcctgtctctctgggaactctgacggcagc
ttgcttcatctagaaacttcagaccatgtcactctgcgcaccattggcattgatagcact
cgggctcctgtgctgtggccacaggaatttgatcaccaaggaagaagaatgcagctcaat
gcttatgcgctcgatttctataaacacggttccttgacaggattggtccaggacaacagg
ataaatgaaggagctgcttatcagttgttggaagatttttccctcaccattaaatctatc
agtgtttctttgcgtgaactatgtggaaatgaagaggacaacgtggtcttagcatttgaa
caactgagtgaaacctttaatgaaaaatttaagaaaatttga
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integrated database retrieval system
