Delphinus delphis (saddleback dolphin): 132428260
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Entry
132428260 CDS
T11117
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04371
Apelin signaling pathway
ddp04613
Neutrophil extracellular trap formation
ddp05034
Alcoholism
ddp05203
Viral carcinogenesis
ddp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
132428260 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
132428260 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132428260 (HDAC4)
05203 Viral carcinogenesis
132428260 (HDAC4)
09165 Substance dependence
05034 Alcoholism
132428260 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddp03036
]
132428260 (HDAC4)
Enzymes [BR:
ddp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132428260 (HDAC4)
Chromosome and associated proteins [BR:
ddp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
132428260 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
132428260
NCBI-ProteinID:
XP_059871804
LinkDB
All DBs
Position
7:1949422..2234255
Genome browser
AA seq
1083 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPARVNHMPGSVDVASALPLPVAPPAVPMDLRLDHQFPLP
ATEPGIREQQLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQELLA
VKHQQELLEHQRKLERHRQEQELAKQQREQKLQQLKHKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASVSYSHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSAP
SSPNNSSGNASAENGIAPAVPSVPTETSLAHRLVTREGSVGPLPLYTSPSLPNITLGLPA
TGPSAGAASQQEAERLALPALQQRISLFPGTHLTPYLGTAPLERDSGATPSSLLQHVVLL
EQPPAQTPLVTDRYLAGLGALPLHAQPLVGAERVSPSVHKLRQHRPLGRTQSAPLPQSAQ
ALQHLVVQQQHQQFLEKHKQHLQQPQLHLSKIIPKASEPARQPESHPEETEEELREHQAL
LEEPFLDRPPGPKEAHTLAGVQVKQEPVESDEDDVAPGQRQPTEQELLFRQQALLLEQQR
VHQLRSYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTL
MLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGRCECIRGRKATLEELQTVHSEAHAL
LYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVEL
VFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVTKTLVVDWDV
HHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPP
MGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM
GLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVI
EIHSQYWRSLQRLASTAGYSLVEAQKCENEEAETVTAMASLSVGVKAPEKRPDEEPMEEE
PPL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccggtggagctgctc
aaccctgcccgcgtgaaccacatgcccggctcggtggatgtggcctcggcgctgcctttg
ccagtggcccccccggcggtgcccatggacctgcgcctggaccaccagtttccgctgccc
gcgacggagcccggcatccgggagcagcagctgcagcaggagctcctggccctcaagcag
aagcagcagctccagaggcagatcctcatcgccgagttccagaggcagcacgagcagctg
tcccggcagcacgaagcccagctccatgagcacatcaaacaacagcaggagctgctggcc
gtgaagcaccagcaggagctgctggagcatcagcggaagctggagagacaccgccaagag
caggagctggcgaagcagcagcgggagcagaagctgcagcagctcaagcacaaggagaaa
ggcaaagagagtgctgtggccagcacagaagtgaagatgaagctgcaggagtttgtcctc
aataagaagaaggcgctggcccaccggaacctgaaccactgcatgtccagtgaccctcgc
tactggtatgggaagacgcagcacagctccctggaccagagctccccgccccagagcggg
gcgtcggtctcctacagccacccggtcctgggcatgtacgacgccaaagatgactttcct
ctcagaaagacagcatctgaacccaatctgaaattacgctccaggctaaagcagaaagtg
gctgaaagacggagcagccccctgttacgcaggaaagatgggccagtggtcacggctcta
aaaaagcgtcctttggatgtcacagactcggcctgcagcagcgccccgggctccgcaccc
agctcacccaacaacagctccgggaacgccagcgcggagaatgggatcgcgcccgccgtc
cccagcgtcccgactgagaccagcctggcacacagactcgtgacgcgagaaggctcggtg
ggcccgctgcccctgtacacgtcaccatccctgcccaacatcacgctgggacttcccgcc
accggcccctccgcgggggcggccagccagcaggaggccgagagactggccctcccggcc
ctccagcaacgcatctcgctcttccccggcacccacctcaccccctacctgggcaccgca
cccctggagcgcgactcgggggcgactcccagctcccttctgcagcacgtggtcctcctg
gagcagccgcccgcgcagacgcccctcgtcacagaccgctatcttgcaggcctgggagcg
ctgcccctgcacgcgcagcccctggtgggggcggagcgcgtgtccccgtcggtgcacaag
ctgcggcagcaccgcccgctgggccgcacgcagtcggcgccgctgccccagagcgcgcag
gcactgcagcacctggtggtccagcagcagcatcagcagttcctggagaagcacaagcag
cacttgcagcagccgcagctgcacctcagcaagatcatccccaaagcgagcgagccggcc
cggcagcccgagagccaccccgaggagaccgaggaggagctgcgcgagcaccaggccctc
ctggaggagccgttcctggaccggcccccagggccgaaggaggcgcacacgctggccggg
gtgcaggtgaagcaggagcccgtcgagagcgatgaggacgacgtggcgccgggccagcgg
cagcccaccgagcaggagctgctgttcagacagcaagccctcctcctggagcagcaacgg
gtccaccagctgaggagctaccaggcgtcaatggaggcggccggcatccccgtgtccttc
ggcggccaccggcctctgtcccgagcgcagtcctcccccgcgtccgccaccttccccatg
tctgtgcaggagcccccgaccaagccgcggttcaccacaggcctcgtgtacgacacgctg
atgctgaaacaccagtgcacctgtgggaacaccaacagccaccccgagcacgccgggcgc
atccagagcatctggtcccggctgcaggagaccggccttcgaggcagatgcgagtgcatc
cgcggacgcaaggccaccctggaggagctgcagacggtgcactcggaggcgcacgccctg
ctctacggcacaaaccccctcaacaggcagaaactggacagtaagaaacttctaggctcg
ctaacatcggtgtttgtcaggctgccctgcggtggtgtcggggtagacagtgacaccata
tggaacgaggtccactcgtcaggggcagcccgcctggccgtgggctgcgtggtggagctg
gtcttcaaggtggccacaggggaactgaagaatggctttgccgtggtccgccccccagga
caccatgcggaggagagcacgcccatggggttctgctacttcaattccgtggctgtcgca
gccaagcttctccagcagaggttgagtgtgaccaagaccctcgtggtggactgggacgtg
caccatgggaacgggacccagcaggccttctacagtgaccccagcgtgctgtacatctcg
ctgcaccgctacgatgacgggaacttcttcccgggcagcggggcacctgacgaggtgggc
acggggcccggcgtgggcttcaacgtcaacatggctttcaccggcggccttgaccccccc
atgggagacgcagagtacttggcggccttcagaactgtggtcatgccgatcgccaatgag
tttgccccagatgtggtgctggtgtcgtcgggcttcgacgccgtggagggccaccccacg
cccctcggaggctacaacctctccgccaaatgtttcgggtacctgacgaagcagctgatg
ggcttggctggcggccggatcgttctggcgctggaggggggccacgacctcacagccatt
tgcgacgcctcggaagcctgcgtctctgctttgctgggaaacgagcttgatcctctccca
gaaaaggttttacagcagagacccaatgcgaacgctgtccggtcgatggagaaggtcatt
gaaatccacagccagtactggcgctccctgcagaggctcgcctccaccgccggctactct
ctggttgaggcccagaagtgcgagaacgaagaggccgagactgtcactgccatggcctcg
ctgtctgtgggcgtgaaggcccccgagaagaggcccgacgaggagcccatggaagaggag
ccccccctgtag
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