Delphinus delphis (saddleback dolphin): 132428491
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Entry
132428491 CDS
T11117
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
ddp Delphinus delphis (saddleback dolphin)
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132428491 (PMS1)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132428491 (PMS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HIRA_B
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
132428491
NCBI-ProteinID:
XP_059872416
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All DBs
Position
7:complement(44374770..44473020)
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AA seq
932 aa
AA seq
DB search
MKQLPAATIRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKANDAPVMAVKYYTSKIRGHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQ
YVLDGSGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKEEIKKVQDLLINYG
ILKPDVRIVFVHNKAIIWQKTRVSDHKMALMSVLGTAVMGNMEPFQYHSEESQIYLSGFL
PKHDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTYYGSLTSTNSYESNKTDVSSDDMVV
SKTTETDVLFTTMETSGNNYPNVDTSAIPFQNDVHNDKSGQNTNYCLNHHMHIGDHCDDH
FNSENSSIDKNSGNTFQEIPMNNLSCEDTQKEYSEVCFVGSVKQAQSENGSKGHIDESGE
NEEEAVPEKSLEICVDDWSKGNVLKDSRGENIEPVKILVPQESLACKVSNNNNNPSPEQK
NLNESSYNKKSNVVDNKSGQLTAYDLISNRVIKKPMSASALFVQDHRAQFLTDNSKTSLE
DATVQLEELWKTLSEEEKLRYEEKATKDLERYNRQIKRAIEQESQVSLKDGKKRIKPTSA
WNLAQKNKLKTSLSNQPKLDELFQSQIEKKTQNIKKVQIPFSMENLKKNSDKHRKFDLEE
KDESYLIHNLKFPDAWLITSKTEIMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTE
SLFNGSHYLEILNKMTADDQRYSGPTYLSDPRLTANGFKIKLIPGVSIAENYLEIEGMAN
CLPFYGVMDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI
ICRMKQQFGNEIKGCVHGRPFFHHLTHLPEAT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgccggcagcaacaattcgcctcctttccagttctcaaataatcacttca
gtggtcagtgtcgtaaaagagctcattgaaaactccttggatgctggtgccacaagcata
gatgttaaactggagaactatggatttgataagattgaggtgcgagacaatggtgagggt
atcaaggctaatgatgcgcccgtgatggcagtgaagtactatacctcaaaaataagaggt
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagccttggggtccatt
tgttgtgtagctgaggttttaattacaacaaggactgctgctgataattttagcacccag
tatgttttagatggcagtggccacataatttctcaaaaaccatcacatcttggtcaaggt
acaactgtaactgctttacgattgtttaagaatctacctgtaagaaagcaattttactca
actgctaaaaaatgtaaagaggaaataaaaaaggtccaagatctcctcataaactatggt
atacttaaacctgatgtaaggattgtttttgtacataacaaggcaattatttggcagaaa
actagagtatcagatcataaaatggctctcatgtctgttctggggactgctgttatgggc
aacatggaaccctttcagtaccactctgaagaatctcagatttatctaagtggatttctt
ccaaagcatgatgcagaccactctttcacaagtctttcgaccccagaaaggagtttcatc
tttataaacagtcgaccagtacaccaaaaagatatattaaagctaatccgacattattac
aatctgaaatgcctaaaggaatctactcgtttgtatcccattttctttctgaaaattgat
gttcctacagctgatgtagatgtgaatttaacaccagataaaagtcaagtattattacag
aataaggaatctgtgttgattgctcttgaaaatctgatgacaacttattatggatcacta
actagtacaaattcttatgaaagtaataaaacagatgtttcctcagatgacatggttgtt
agtaaaacaacagaaacagatgtgctttttactacgatggaaacatctggaaataattat
ccaaatgttgatacttcagccattcctttccagaatgatgtgcataatgataaatctggg
caaaacactaattattgtttgaatcatcatatgcatattggtgaccattgtgatgatcat
tttaatagtgaaaattctagcattgataagaacagtgggaatacatttcaggagattcca
atgaataatttatcatgtgaggacacccaaaaggaatatagtgaagtttgttttgtaggt
tctgttaagcaagcccaatcagaaaatggcagtaaaggccatatagatgagagtggggaa
aatgaggaagaagcagttcctgagaagtctttggaaatttgtgtagatgactggagcaag
ggaaatgtacttaaagattcaagaggagaaaacattgaacctgtgaaaattttagtacct
caagaaagtttagcatgtaaagtaagtaataataataataacccaagtcctgaacaaaag
aatttgaatgaaagttcctataacaaaaaatcaaatgtggtagataacaaatctggacag
cttacagcttatgatttaattagcaatcgagtaatcaagaaacccatgtcagcaagtgcc
ctttttgttcaagatcatcgtgctcagtttctcacagacaattccaagaccagtttggaa
gatgcaacagtacaacttgaagaactgtggaagacattgagtgaagaggaaaaactgaga
tatgaagagaaggctactaaagacttggaaagatacaataggcaaatcaagagagctatt
gaacaggagtcgcaagtatcattaaaagatggcaaaaaaaggataaaacccaccagcgca
tggaatttggcacagaagaacaagttgaaaacttcattatctaatcagccaaaacttgat
gagctctttcagtcccaaattgaaaaaaaaacccaaaacattaaaaaagttcagatcccg
ttttctatggaaaacttaaaaaagaattctgataaacataggaaatttgacttagaagaa
aaggacgaatcttacttgatccacaatctcaagtttcctgatgcgtggctaattacatcc
aaaacagagataatgttattaaatccatacagagtggaagaagcgctgctatttaaaaga
cttcttgagaatcacaaacttcctgcagagccgctcgaaaagccaattatattgacagag
agtctttttaatggatctcattatttagagattttaaataaaatgacagcagatgaccaa
agatacagtggaccaacttacctgtccgatcctcgtctcacagcaaatggtttcaagata
aaattgataccaggagtttccattgctgaaaactacttggaaatagaaggaatggctaat
tgtcttccattctatggagtgatggatttaaaagaaattcttaacgctatattaaacaaa
aatgcaaaggaagtttatgaatgtagacctcgcaaagtgataagttatttagagggagaa
gcagtgcgtctgtctagacagttacccatgtacttatcaaaagaggacatccaggatatt
atctgcagaatgaagcaacaatttggaaatgaaattaaaggctgtgttcatggtcgccca
ttttttcatcatttaacccatctcccagaagctacatga
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