Delphinus delphis (saddleback dolphin): 132428501
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Entry
132428501 CDS
T11117
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04611
Platelet activation
ddp04820
Cytoskeleton in muscle cells
ddp04926
Relaxin signaling pathway
ddp04933
AGE-RAGE signaling pathway in diabetic complications
ddp04974
Protein digestion and absorption
ddp05146
Amoebiasis
ddp05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132428501 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
132428501 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
132428501 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
132428501 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
132428501 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
132428501 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132428501 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ddp00536
]
132428501 (COL3A1)
Glycosaminoglycan binding proteins [BR:
ddp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132428501 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
132428501
NCBI-ProteinID:
XP_059872437
LinkDB
All DBs
Position
7:complement(45230660..45269390)
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AA seq
1464 aa
AA seq
DB search
MMSFVQKGIWLLFALLHPTVILAQQEVVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPTGQGPQGPKGDPGPPGIPGRN
GDPGIPGLPGSPGSPGPPGICESCPTGSQNYSPQYEAYDVKSGVPGGITGYPGPPGPPGP
PGPPGTSGHPGSPGAPGYQGPPGEPGQAGPAGPPGSPGAIGPLGPAGKDGESGRPGRPGE
RGLPGPPGIKGPTGMPGFPGMKGHRGFDGRNGEKGDQGAPGLKGENGLPGENGSPGAMGP
RGPAGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGS
SGSPGQRGEPGPQGHAGAPGLPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPSGT
NGAPGQRGAAGEPGKNGAKGEPGPRGERGEAGSPGIPGLKGEDGKDGSPGEPGANGLPGA
AGERGMPGFRGPAGANGLPGEKGPPGERGGPGPAGSRGAPGEPGRDGLPGGPGLRGMPGS
PGGPGSDGKPGPPGSQGETGRPGPPGSPGSRGQPGVMGFPGPKGNDGAPGKNGERGSPGG
PGPQGPAGKNGETGPQGPPGPTGPGGDKGDIGSPGPPGLQGLPGTGGPPGENGKPGEPGP
KGEAGAPGIPGGKGDSGAPGERGPTGPAGPPGPRGGTGPPGSEGGKGPAGPPGPPGNAGS
PGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGE
SGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGI
AGPPGSAGPSGAPGPPGVKGERGSPGGPGAAGFPGARGPIGPPGSNGNPGPPGAGGPPGK
DGPQGPAGNNGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIIGVPGARGLAGP
QGMPGPAGRAGPPGPKGESGKPGLSGLNGERGPPGAQGLPGLAGAAGEPGRDGNPGSDGL
PGRDGAPGSKGDRGENGSPGPPGAPGHPGPPGPVGAAGKSGDRGETGPAGPSGAPGPVGS
RGPPGPQGPRGDKGETGERGINGIKGHRGFPGNPGAPGSPGPSGHQGAVGSPGPAGPRGP
VGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGVPGPCCPGGP
SGIISVGGEKSGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLLSPDGSRKNPARNC
RDLKFCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCINASPLTVPRKNWWTNSAAE
KKHVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSQASQNITYHCKNSIAYMDHA
SGNVKKALRLMGSNDGEFKAEGNGKFTYSVLEDGCTKHTGEWGKTVFEYRTRKAVRLPIV
DIAPYDIGGPDQEFGVDVGPVCFL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggatctggttacttttcgccctgcttcatcccactgtt
attctggcacaacaggaagttgttgaaggaggatgctcccatcttggtcagtcctatgcg
gatagagatgtctggaaaccagaaccatgccaaatatgcgtctgtgactcaggatctgtt
ctctgtgacgacataatatgtgatgaccaagaattagactgtcccaaccccgagatccca
tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctact
ggtcaaggacctcaaggccccaaaggagatccaggtcctcctggtattcctgggagaaat
ggtgatcctggtattccaggactgccaggttcccctggttctcccggccctcctggaatc
tgtgaatcgtgcccaactggtagccagaactattctccccagtatgaggcatatgatgtc
aagtctggagtaccaggaggaatcacaggctatcccgggccacctggtccgcccggccca
cctggtccccctggtacatctggtcatcctggttcccctggtgctccaggataccaaggt
ccccctggtgaacctgggcaagctggtcctgcaggtcctccaggatctcctggtgctata
ggtccattaggtcctgccggaaaggatggggaatcaggaagacccggacggcctggagag
cgaggactgcctggccctccaggtattaaaggtccaactggcatgcctggattccctggt
atgaaaggacatagaggctttgatggacgaaatggagaaaaaggtgatcaaggtgctcct
ggattaaagggtgaaaatggccttccaggtgaaaatggatctcctggagcaatgggtcca
agaggacctgctggtgagagaggacgaccaggacttcctggagctgcaggggctcgaggt
aatgatggagctcgaggaagtgatggacagccaggtccccctggtccccctggaactgca
ggattccctggttcccctggtgctaagggtgaagttggacctgcgggatctcctggttct
agtggctcccctggacaaagaggagaacctggacctcagggacatgctggtgctccaggt
cttcctggccctcctgggagtaatggtagtcctggtggtaaaggtgaaatgggtcctgct
ggcattcctggggcccctggactgataggagcccgcggtcctccaggaccctctggtaca
aatggtgctcccgggcagcgaggtgctgcaggtgaacccggtaagaatggagccaaagga
gagccaggaccacgtggggaacgcggggaggctggttctccaggtattccaggacttaag
ggtgaggatggcaaagacggttctcctggagaacctggtgcgaacggacttcccggagct
gcaggagaaaggggtatgcctggattccgaggacctgctggagcaaatggccttccagga
gaaaagggtccccccggggagcgtggtggcccaggccctgcagggtccagaggagctcct
ggagaacctggccgagacggcctccctggaggtccaggattgaggggtatgcctggtagt
cctggaggaccaggaagcgatgggaaaccagggcctcccggaagtcaaggagaaactggt
cgaccaggtcctccaggctcacctggttcccgaggtcagcctggtgtcatgggtttccct
ggtcctaaaggaaatgatggcgctcctggaaagaatggagaacgtggtagtcctggaggt
cctggccctcagggtcctgctggaaagaatggcgagactggacctcagggtcccccagga
cctaccgggccaggtggtgacaaaggagacataggaagccctggtccaccaggattacaa
ggcttgcctggaacgggtggtcctccgggagaaaatggaaaacctggtgaacctggccca
aagggtgaggctggtgcacctggaattccaggaggcaagggtgattctggtgcccctggt
gaacgtggacctactggacctgcagggccccctgggcctagagggggaactggcccccct
ggttctgaaggaggaaagggccctgctggtccccctgggccacctggtaatgctggttca
cctggtctgcaaggaatgcctggagaaagagggggtcctggaggccctggtccaaaaggt
gataagggtgagcccggcagttcaggtgtcgatggtgctccagggaaagatggtccaagg
ggtcctactggtcccattggtccccctggcccagctggtcagcctggagataagggtgaa
agtggtgcccctggacttccgggtatagctggtcctcgtggtggccctggtgagagaggt
gaacatgggccaccaggacctgccggcttccctggtgctcctggccagaacggtgagcct
ggtggtaaaggtgaaagaggcgctcctggtgagaaaggtgaaggtggacctcctggaatc
gcagggccccccggaagtgctgggccttctggtgcccctggtcccccaggtgtcaaaggc
gaacgtggcagtcctggtggtcctggtgctgctggcttccctggtgctcgtggtcctatt
ggtcctcctggcagtaatggtaacccaggccccccaggagccggcggccctccaggcaaa
gatggcccccaaggtccagctggtaataatggtgctcctggcagccctggggtgtctgga
ccaaagggtgatgctggccaaccaggtgagaagggatcacctggcgcccagggccctccg
ggagctccaggcccacttgggattataggggttcctggagcacgaggtcttgcaggccca
caaggcatgccaggtcctgcgggcagagccggcccaccgggccccaagggtgaaagtggg
aagccaggacttagtggtctcaatggagaacgtggtcctcctggagcccagggtcttcct
ggtctggctggtgcagctggtgaacctggaagagatggaaaccctggatcagatggtctg
ccaggccgagatggagctcctggtagcaagggtgaccgtggtgaaaatggctctcctggc
ccccctggtgctcctggtcatccaggcccccctggccctgtcggtgcagctggaaagagt
ggtgacagaggagaaactggccctgctggtccttctggtgctccaggtcctgttggctca
agaggtcctcctggtccccaaggcccacgtggtgacaaaggtgaaacgggtgaacgtggc
attaatggcatcaaaggacatcgtggattccctggtaatccaggtgccccaggttcccca
ggtccctctggtcaccaaggtgcagtaggtagtccaggacctgcaggccccagaggacct
gttggacccagtgggccccctggcaaagatggaacaagtggacaccctggtcccattgga
ccaccagggcctcgaggtaacagaggcgaaagaggatctgagggctccccaggccaccca
ggacaaccaggccctcctgggccccctggtgtccctggtccatgctgtcctggtgggcct
agtggcatcattagcgttggaggtgaaaaatctgggggttttgccccatattatggagat
gaaccaatggatttcaaaatcaacaccgacgagattatgacgtcactcaaatcagtcaat
ggacaaatagaaagcctccttagtcctgatggttcccgtaaaaaccctgctcggaactgc
agagacctgaaattctgccatcctgaactcaagagtggagaatattgggttgatcctaac
caaggttgcaagatggatgctattaaagtatactgtaacatggaaactggggaaacgtgc
ataaatgccagtcctttgactgttccacgtaagaactggtggacaaattctgctgctgag
aagaaacatgtttggtttggagaatccatggatggtggttttcagtttagctatggcaat
cctgaacttcctgaagatgtcctcgatgtccagctggcattcctccgacttctttccagc
caggcctcccagaacatcacatatcactgcaagaatagcattgcatacatggatcatgcc
agtgggaatgtgaagaaagccttgaggctgatgggctcaaatgacggtgaattcaaggct
gaaggaaatggcaaattcacctactcagttctggaggatggttgcactaaacacactggg
gaatggggcaaaacagtcttcgaatatcgaacacgcaaggccgtcagactacctattgta
gatattgcaccctacgatattggtggtcctgatcaagaatttggtgtggacgttggccct
gtttgctttttataa
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