Delphinus delphis (saddleback dolphin): 132429953
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Entry
132429953 CDS
T11117
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132429953 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132429953 (PATL1)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132429953 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
132429953 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
132429953
NCBI-ProteinID:
XP_059874947
LinkDB
All DBs
Position
8
Genome browser
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPRPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDVSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQVLCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPAPATPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMV
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSATVTSLLQQL
MNLPQSAAAPAPCNPHLTAVLQNKFGLSLLLLVLSRGEDLQGSDPTSESTQSNQWTEVMF
LATRELLRIPQAALAKPVSIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggtgaggaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagcta
cccgtggcggttaatgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gatcatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtacagaccaggccagtgttgcaaccccgaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccacag
ggcccagaagatgatcgggacgtttctgagcgtgcattaccgaggcggtcaacttcgcct
atcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacaggttctgtgtccgaagcctgtccatgttcgacccccaatg
ccaccacgctatcctgctccctacggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccagcccctgctacaccgcctcctcctcagcagcaccctcctggcccagggcctcac
ctgcaaaacctaagatcacaggccccaatgtttagaccagacacaacccaccttcatcca
cagcaccgtcgactcttgcatcagagacagcaacagaataggaatcagcatcggaatctc
aatggtgcaggagatagaggaagtcaccggagcagtcatcaggatcatctccgaaaggat
ccatatgccaatctcatgttgcagcgagaaaaggattgggtctctaaaatccagatggtg
cagctgcaaagcactgatccctacctggatgatttttattaccagaattattttgaaaaa
ctggagaaactgtcagctgctgaagaagtgcaaggtgatggcccaaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagtttgag
ggctctttgggaaagcttactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacatctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttgtcataattgagaagacctatagtttactccttgatgtggaggattat
gaaaggcgttacctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaggagaggccc
agtgatgaccactttgtacagatcatgtgcatcagaaaagggaagagaatggttgcccgt
attcttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctccctttccttatcaagaaggatgcacaagatgaggtgctaccatgcttattgagtccc
ttctctcttctcctctatcatcttccatcagcgactgtcaccagccttctgcaacagcta
atgaacctacctcagagtgcagctgcaccggcaccctgcaatcctcacctcactgctgtg
ctccagaacaagttcggcctgtcactgctcctcctcgtgctgagccggggggaagacctg
cagggctcagaccccacttcagaatcaacgcagagcaaccagtggacggaggtgatgttc
ctggcaacccgagaacttctgcggattccccaggcagccctggccaagccagtctctata
cccacaaatctagtatccctgttttctcgttacgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacgataa
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