Delphinus delphis (saddleback dolphin): 132430147
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Entry
132430147 CDS
T11117
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddp03009
]
132430147 (IGHMBP2)
03012 Translation factors [BR:
ddp03012
]
132430147 (IGHMBP2)
Enzymes [BR:
ddp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132430147 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
132430147 (IGHMBP2)
Ribosome biogenesis [BR:
ddp03009
]
Eukaryotic type
Other ribosome biogenesis factors
132430147 (IGHMBP2)
Translation factors [BR:
ddp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132430147 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
DEAD
Viral_helicase1
nSTAND3
AAA_22
AAA_16
Helicase_RecD
IstB_IS21
AAA_25
SLFN-g3_helicase
UvrD-helicase
PhoH
Flavi_DEAD
NPHP3_N
SRP54
AAA
Zot
Ada3
DAP3
ABC_tran
ATPase
DnaB_C
AAA_31
UvrD_C_2
AAA_33
Motif
Other DBs
NCBI-GeneID:
132430147
NCBI-ProteinID:
XP_059875435
LinkDB
All DBs
Position
8:106017377..106042999
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AA seq
982 aa
AA seq
DB search
MASATVESFVNKQLDLLALERDAEVEERRSWQESVSPKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCMSAAVLPSNSFISGDIVGLYEEDSQLATGILTRITQQWVTVAFDESHD
LQLSLDQEHSYRLLKLANDVTYKRLKKTLITLKKYHSGPASSLTEVLFGGSDPSPASEIP
PLTFYNATLDASQQEAVWFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGSKVLCCAP
SNIAVDNLVEQLAQWKQRLLRLGHPARLLESVQQHSLDAVLARGDGTRIVADIRKDIDQA
FAKSKKTRNKREKSNFRNEIKVLRKELKEREEAAMLESLVAANVVLSTNTGASSDGPLKL
LPEGHFDMVVIDECAQALEASCWIPLLKARKCVLAGDHRQLPPTIFSHKAALAGLSLSLM
ERLAEGHGARSVRMLSVQYRMHQAIARWASEALYHGQLTTHPSVAGRLLRDLPGVAATEE
TGVPLLLLDTAGCGLFELEDEDEQSKGNPGEVRLVSLHVQALVDAGVQAGDIAIITPYNL
QVDLLRQSLTHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAENRRVNVAVTR
ARRHVAVVCDSHTVSSHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYSREGAQGPGQAD
VKTRGSAATARRAPGSRQPTGAALGRKKPGTAPLSSEAQPQLSLNGGGREGARSRDGAEQ
FRAVITEFVASEKTQLEFPASLDSQDRMWVHQIAEEYGLRHESAGEGKERFITVSKRVPA
APAAPATPAGPGSKAPLCPEPPSPAQAEPAIGEQSSRGQPDLKALHLDRLQRAGSQPEQR
ATGSGPRKLPEKKKKKEAEGPMAIDLPAGEDFDALVSAAIKADNTCGLAECTASVITLGQ
LCLHCGRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKDRSLDPAKRAQLQR
RLDKKLDQLTGQRRGKRKEKGK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgaccgtggagagcttcgtgaacaagcagttggacctgctggcgctcgag
agggacgcggaggtcgaggagcgcaggtcctggcaggaaagtgtctctccgaaagaactc
cagagccgaggcgtctgcttgctgaagctgcaggtatccagccagcggaccgggctgtac
ggacggttgctggtcacctttgagcccaggagatgcatgtctgcagctgtgcttcccagt
aacagctttatttccggtgacatagtgggtctgtatgaggaagacagtcagttggccact
gggatcctgacccggatcacccagcagtgggtcaccgtggcctttgatgagtcccatgat
ttacagttgagtttggaccaagagcattcctacaggctgttaaaacttgccaacgacgtc
acttataagcgactgaaaaaaactctgattacccttaagaagtatcattctggccccgcg
tcctcgctcacagaggtcctcttcggcggatcagaccccagccctgccagtgagataccg
cccctgactttctacaacgccactctggacgcctcccagcaggaagcggtctggttcgcg
ctgtcccagaaggaactcgccatcatccacgggcctcccggcaccgggaagaccaccact
gtggttgaaatcattctccaagctgtgaaacagggctcaaaggttctgtgctgcgccccc
tctaacatcgccgtggacaacttggtcgagcagctggcccagtggaagcagaggctcctg
cgcctcgggcaccccgcacggctcctggagtctgtccagcaacactccctggacgcggtc
ttggcgcggggtgacggcacccggattgtggctgacatcaggaaggacatcgaccaggcc
ttcgcaaaaagcaaaaagacccggaataaaagagagaaaagtaattttcgaaatgaaatc
aaggtgttaaggaaggaactgaaggagagggaggaagcagccatgctggagagcctggtt
gcggccaacgtggtcctctcgacaaacacaggtgcctcttcggacggccccttgaagctg
ctgccagaaggccacttcgacatggtggtcattgacgagtgtgcccaggccctggaggcc
agctgctggatccccctgctgaaggccaggaaatgcgtcctggccggagaccacaggcag
ctgccccccaccatcttctctcacaaggccgcactggcggggctgtcgctgagcctgatg
gagcgcctggcggaagggcatggcgcccggtcggtgcggatgctgagcgtgcagtaccgc
atgcaccaggccatcgcgcgctgggcctcggaggccctgtaccacggccagctcacgacc
cacccttccgtggccgggcgcctcctgcgggatctcccgggagtggctgccacagaggag
acgggtgtccccctgctgctgctggacacggccggctgcgggctgtttgagctggaggac
gaggatgagcagtctaaagggaaccctggtgaagtgcgcctcgtcagtctgcacgtccag
gcgctggtggacgccggtgtccaggccggcgacatcgccatcatcacgccgtacaacctg
caggtggacctgctcagacagagcctcacgcacaggcacccggagctcgagattaagtct
gtcgacggcttccagggccgagagaaggaggctgtgatcctgtccttcgtcagatccaac
aggaaaggtgaggttggcttcctcgccgagaaccggcgcgtcaatgtggccgtcacccgc
gcccggcggcacgtggccgtggtctgcgattcccataccgtcagcagccacgccttcctg
aagacgctggtggactacttcacagagcacggggaggtgcgcacagcctttgagtatctc
gacgacatcgtccctgaaaactactcccgtgagggtgcccagggccctggccaggccgat
gtgaagacccgcggctctgccgcgacggccaggagggctcccgggagcaggcagcccacg
ggggccgcgctgggtcggaagaagccgggcacggcgcctttgtcctccgaggcccagcct
cagctcagcctcaacgggggcggccgggagggggccaggagcagagatggcgcagagcaa
ttcagggctgtgataacggagttcgtggcgagtgagaagacacagctagagttccctgcc
tccctggattcgcaagacaggatgtgggtccatcagatcgcggaagagtacgggctgagg
catgaaagtgccggggaggggaaggaacggttcatcaccgtgagcaagagggtcccagcg
gcccctgcggctccagcaaccccggcagggcctggcagcaaagcccctctgtgtccagag
ccccccagccctgcgcaggcagagcccgccatcggggagcagagcagccggggccagccg
gacctgaaggcgctgcacctggacagactgcagagggcggggagccagccggagcagcgg
gccacgggctccgggccgcggaagttaccagaaaagaaaaagaagaaagaagcagaagga
cccatggccatagatctgcccgccggggaggactttgacgccctggtctcggccgccatc
aaggctgacaacacttgcggcctcgccgagtgcacagccagcgtcataaccctgggccag
ctctgtctgcactgcggccgccgttactgcctcagccaccacctgcccgagatccacggc
tgtggggagagggctcgcgcccatgcgcggcagaggattagccgggaaggggtcctctac
gccggcagcgggaccaaggacaggtccctggaccctgccaagagggcccagctgcagagg
aggctggacaagaagctggaccagctgaccggccagcggaggggcaagaggaaggagaag
gggaagtga
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