Delphinus delphis (saddleback dolphin): 132431615
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Entry
132431615 CDS
T11117
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132431615 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132431615 (TRIM71)
04121 Ubiquitin system [BR:
ddp04121
]
132431615 (TRIM71)
Enzymes [BR:
ddp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132431615 (TRIM71)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132431615 (TRIM71)
Ubiquitin system [BR:
ddp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132431615 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
132431615
NCBI-ProteinID:
XP_059877356
LinkDB
All DBs
Position
10:52269115..52326765
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AA seq
872 aa
AA seq
DB search
MASFSETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAAAGAGGHSNHRHHAHHAHPRASASAPPPLPPAPQPPAPPRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPTAAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVP
ICRECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMK
AKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTIS
AVQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFG
FVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLF
GAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSF
GSEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRP
AGVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILV
SDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHP
DCQSARFLGSEGTANGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGS
GFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttctccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtcggcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccccggggctgcggcgcgccgcctacacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcgccgggagagccgctcaagttgcgctgccctgtgtgcgaccagaaggtcgtgctg
gccgaggcggcgggcatggacgcgctgccctcgtccgccttcctgctcagtaacttgctc
gacgccgtggtggccacggctgacgagccgccgcccaagaacgggcgggccggcgccgcg
gcgggcgcgggcggccacagcaaccaccgacaccacgcgcaccacgcgcacccgcgcgct
tctgcctcggcgccgccgccactcccgccagcgccgcagccgcccgcgccgccccgctca
gcgcccggcggccccgcggcttccccgtcggcgctgctgctgcgccggcctcacggctgc
agctcctgcgacgagggtaacgcggcttcgtcgcgctgcctcgactgccaagagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgccttaccaaggaccactacatcgaa
cgcggcccgcctggccccacagccgccgccgccgccgccgcggcgcagcagctcgggctc
gggccgcccttccccggcgcgcccttctccatcctctcggtcttccccgagcgcctcggc
ttctgccagcaccacgacgacgaggtgctgcacctgtactgtgacacgtgctcagtgccc
atctgccgagagtgtactgtgggccggcacggcggccacagcttcgtctacctccaggag
gcgctgcaggactcacgggcgctcaccatccagctgctggctgatgcccagcagggccgc
caggccatccagctgagcatcgagcaggcccagacggtggcagagcaggtggagatgaag
gcaaaagtggtacagtcggaggtcaaagccgtgactgcgagacacaagaaggccctggag
gagcgggagtgtgagctgctgtggaaggtagagaaaatccgccaggtgaaagccaagtcc
ctgtacctgcaggtggagaagctgcggcaaaacctcaacaagctggagagcaccatcagc
gccgtgcagcaggtcctggaggaggggcgggcgctggacatcctgctggcccgagaccgc
atgctggcgcaggtgcaggagctcaagaccgtgcgcagcctcctgcagccccaggaggac
gaccgggtcatgttcacaccccctgaccaggccctctacctcgccatcaagtccttcggc
tttgtcagcagcggggccttcgcgccgctcaccaaggccacgggcgacggcctcaagcgg
gccctccagggcaaggtggcctccttcactgtcatcggctacgaccatgacggggagccc
cgcctctcaggaggcgacctcatgtcggctgtggtcctgggccctgacggcaacctgttt
ggtgcggaggtgagcgaccagcagaacgggacatacgtcgtgagctaccggccgcagctg
gagggcgagcacctggtatcggtcaccctgtgcaaccagcacatcgagaacagccccttc
aaggtggtggtcaagtccggccgcagctacgtgggcatcgggctcccgggcctgagcttc
ggcagtgagggcgacagcgatggcaagctgtgccggccctggggcgtgagcgtggacaag
gagggctacatcgtggtcgctgaccgcagcaacaatcgcatccaggtgttcaagccctgc
ggcgccttccaccacaagttcggcactctgggctcccggcccgggcagtttgaccggcct
gccggcgtagcctgtgacacctcccgcaggatcgtggtggccgacaaggacaatcatcgc
atccagatcttcacctttgagggccagttcctcctcaagttcggtgagaagggcaccaaa
aacgggcaatttaactacccttgggatgtggcggtgaattccgagggcaagatcctggtc
tccgacacgcggaaccaccggatccagctgttcgggcccgatggggtcttcctgaataag
tatggcttcgagggggctctctggaagcactttgactccccgaggggggtggctttcaac
cacgagggccacttggtggtcaccgacttcaacaaccaccggctcctggtcattcaccca
gactgccagtcggcccgcttcctgggctcagagggcaccgccaatgggcaattcctgcgc
ccacagggcgtggccgtggaccaggaggggcgcatcatcgtggccgattccaggaaccac
cgggtgcagatgttcgagtccaacggcagcttcctgtgcaagtttggcgctcagggcagt
ggctttgggcagatggaccggccctccggcatcgctgtcacgccggatgggatgattgtc
gtggtggactttggcaacaatcgaatcctcatcttctaa
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