Delphinus delphis (saddleback dolphin): 132432222
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Entry
132432222 CDS
T11117
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ddp Delphinus delphis (saddleback dolphin)
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ddp04040
]
132432222 (SCN11A)
Ion channels [BR:
ddp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132432222 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
132432222
NCBI-ProteinID:
XP_059878305
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All DBs
Position
10:60999808..61130476
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AA seq
1784 aa
AA seq
DB search
MDDRCCPVIFPDARNFRPFTPDSLAAIKKRIAIQKEKKKSKDQTAAEPQPRPQLDLKVSR
KLPMLYGDIPHELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMAMTRGKDSINIDTESAEYVFTGIYIFEALVKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYIKDSSISLSSLRTFRVFRALKAISVIS
GLKVIVGALLRSVKRLIDVMILTLFCLSIFALVGQQLFMGNLNQKCVRKDCDSDYKDYCF
EKKESTEFRICGTWMESGACSEQFECKHTNKNPDYNYTNFDSFGWSFLAVFRLMTQDSWE
KLYQQTLRTSGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAETEAKEKMFQ
EAQQRLKEEKEALVAMGIDRSSLNCLEASSFSLKKRKLFGNKKRKSFFLRKSGKDQVPGL
DSDEDSSKKPHLLEQTKRLSQNLSVEHCDEHRDPFQRQRALSAVSILTITMHEQEKSQEP
CLPCGENLASKYLVWDCSPRWLCIKKALRTMMTDPFTELAITICIIINTLFLAMEHYQMD
QSFENMLYTGNLVFTGIFMAEMCLKIIALDPYHYFHGGWNIFDSIIALLSFAEVIINSMC
PGKQSCMSLRSLRVLRVFKLAKSWPTLNTLLKIIGHSVGALGNLTVVLAIVVFIFSVVGM
QLFGSKFNCIKSNSKSHDPAVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEANQ
ALCIIVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGHLEGEVRKTKVQLALDRFCRAFC
FVICTLEHFCTKWCRRQHLPKEEEVTEGPEAESKGVIPLVTEMRKGPETWEEFGVLTSAP
KTLSVGHDRTWLAPLAEEEDDAESPGEDKAQPITQPEAGKQCQASELHQKTKEPTSPGAQ
SVEMDIFSEGDLYLSVQNPRKKSDATSVLSECSTTGPQDPFRRVLEMVPKKEPERCLPKG
LDCCSPCCTMDKRKFPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLGT
QPKIQKILNCTESIFTYIFILEMGLKWVAFGFRKYFTSAWCWLDFIIVIVSVTSLIDLKV
LKSFRILRALSPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLFSG
KFGRCVNVTDGNSVINYNIVANRSQCESGNFSWFTLKVNFDNVGMAYLALLQVATFKGWM
DIMYAAVDSRGEGQQPRFEENSLMYVYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISG
QDIFLTEEQKKYYNAMKKLGSKKPQRPIPRPLNKCQGLVFDLVTHQVFDIIIIILIFLNM
VSMMAESYGQSRAMELFLERLNLAFVAVFTTECLIKIFALRQYYFTSGWNLFDCVIVVIS
IVSTIVSALKTQAHIPFPPTFFRIVRLARIGRILRLVQAARGIRTLLFALMMSLPSLFNI
GLLLFLVMFIYAIFGMNCFCKVKEESGIDDIFNFKTFKGSMLCLFQITTSAGWDALLSPM
LQSKDSCNPKSENCYLSAIAITYFVSYIIISFLIVVNMYIAVILENFNIATEESEDPLGE
DDFEIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRL
HCLDILFAFTARVLGESSGLDSMKAVMEEKFMETNPFKKLYEPIVTTTKRKEEERCAAVI
QKAFRKYMMKTKCTLEDRPHSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctgcccggtgatcttcccagatgcgaggaatttccgccccttcact
cctgactctttggctgcaatcaagaagcggatcgccatccagaaggagaaaaaaaagtcc
aaagaccagacagcagcagaaccccagcctcgacctcagcttgacctaaaggtgtccaga
aagttgcccatgctctatggtgacattccccatgagctgatagggaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaaacgtgccttgttcattttggggcctttcaattcaatcagaagt
ttagccattagaatttcagtccattcattgttcagcatgttcatcatctgcaccgtcatc
atcaactgcgtgttcatggccatgactcgtgggaaggacagcattaacatagatactgag
agtgctgagtatgtcttcactgggatttatatatttgaagcattagttaaaatattggca
agaggttttattctggatgagttttctttccttcgagatccgtggaactggctggactcc
attgtcattgcaacagcgtttgtgtcatattcaccatatatcaaggacagcagcatcagt
ctgtcatccctgcgtaccttccgagtgttcagagctttgaaagcaatttcagtaatttca
ggtctgaaggtcattgttggggccttgctgcgctctgtgaagaggcttatcgatgtgatg
atcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatggga
aatctgaaccagaaatgtgtgaggaaagactgtgactctgactataaagactattgcttt
gaaaagaaagagtccactgaattcagaatatgtggcacatggatggagagcggggcttgt
tctgaacaatttgaatgcaaacataccaataaaaatcctgactataattacacgaatttt
gacagctttggctggtcttttcttgccgtgttccggcttatgacccaagattcctgggag
aagctttatcaacagactttgcgcacctcagggctctactcagtcttcttctttgtggtg
gtcatcttcctgggctctttctacttgattaacttaaccctggctgttgtcaccatggct
tacgaggaacagaacaagaatgtagctgctgagacagaagccaaggagaagatgttccag
gaagcccagcagcggttaaaggaggagaaggaggctctggttgccatgggtattgacaga
agttcacttaattgccttgaagcatcatctttttccctgaagaagagaaagctatttggt
aataagaaaagaaaatccttctttttgagaaagtctgggaaagaccaggttccaggatta
gattctgatgaagattcttcaaaaaagccacacctacttgaacaaaccaaacgactgtcc
cagaatctgtcagtggagcactgtgatgagcacagagaccccttccaaaggcagagagca
ctgagcgctgtgagcatcctcaccatcaccatgcacgaacaagaaaaatcacaggaacct
tgcctcccatgtggggaaaacctggcatccaaatacctcgtgtgggactgtagcccccgg
tggctgtgcattaagaaggccctgagaaccatgatgactgacccctttactgagctggcc
atcaccatctgcatcataatcaacactctcttcttggccatggagcattaccaaatggac
cagagttttgagaacatgttatacacagggaatttggttttcactggcattttcatggct
gaaatgtgcctaaaaatcattgcgctggatccctaccactactttcatggaggctggaac
atttttgacagcattattgctcttctgagttttgcagaggtgataataaatagtatgtgt
ccaggaaaacaaagttgtatgtcacttcgttccttaagagtgctgagggtcttcaagtta
gccaaatcctggccaactttaaacacactgcttaagataattggccattccgttggagcc
cttggaaacctgactgtggtcttggccattgtggtctttattttctcagtagttggcatg
cagctttttggctctaaattcaattgcataaagagtaattcaaagtcccatgaccctgca
gtcccatgtttacgacgctggcacatgggggatttctaccactcctttctggtggtattc
cgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaagaagctaaccaa
gcactgtgcattattgtgtttctgttgatcatggtgataggaaaactcgtggtactcaac
ctcttcattgccttgctgctcaattccttcagcaatgaggagagagatggacacttggaa
ggagaggtcaggaaaaccaaagtccagttagccttggaccggttctgccgggctttttgt
tttgtcatatgcactcttgagcatttttgtaccaagtggtgcaggagacaacatttacca
aaggaagaagaggtgacagaaggccctgaggcagagagcaaaggtgtcattcccctggtc
acagagatgagaaagggcccagagacctgggaggagtttggtgtactgacttccgcacca
aagaccttgagtgtcgggcatgatcggacttggttggccccactagcagaggaagaagat
gatgctgaatcccctggtgaagataaggcacagcctatcacacaacctgaggctggaaaa
cagtgtcaggccagtgaactccatcagaagaccaaggagcccaccagtccaggagctcag
agtgtggaaatggacatattctctgaaggtgatctttatctgtcggtacagaatccccga
aagaagtctgatgctacgagtgtgctctcagaatgtagcaccactggtccacaggatccc
tttaggcgggtacttgaaatggttcccaaaaaggaaccagagagatgtttgcccaaaggc
ctggattgctgctctccatgctgtactatggacaagaggaagttcccctggatcatttgg
tggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagctttatt
atctttgtgattctgctgagcagtggggcactggtatttgaagatatttaccttggtaca
caacccaaaatccaaaaaatacttaattgtactgagagtattttcacatacatttttatc
ttggagatgggtctgaaatgggtggcctttggatttaggaagtatttcaccagtgcctgg
tgctggctcgatttcatcattgtgattgtctctgtgaccagtctcatcgacttaaaggtc
ttgaagtccttccggattctgcgagcgctgagccctctgagagcactgtcccagtttgaa
ggaatgaaggtggtagttaatgctctcataggtgccatacctgccatcctgaatgttttg
cttgtctgcctcattttctggctcatattttgtatcctgggagtaaatttgttttctgga
aaatttggaagatgtgttaatgtaacagatggaaactcagttataaattacaacattgtt
gcaaaccggagtcaatgtgaaagtggaaatttctcctggttcaccctgaaagtcaacttt
gacaatgtgggaatggcttacctggcgctgctgcaagtggcaacatttaagggctggatg
gatattatgtatgcagctgttgattccagaggggaaggacaacagccaaggtttgaggag
aactcattaatgtatgtttacttcgtagtttttatcatctttggctcattcttcactctg
aatctctttattggtgttattattgacaacttcaaccaacagcagaaaaagataagtggc
caagacatctttctgacagaagaacagaagaaatactataatgcaatgaaaaaattagga
tccaaaaaacctcaaaggcccatcccaaggcctctgaacaaatgccagggtcttgttttt
gacctagttacacaccaggtctttgacatcatcatcatcatcctcattttcctcaacatg
gttagcatgatggctgaatcatatggccagtccagagccatggaactcttccttgagcgt
ctcaacctggcctttgtggccgtctttacaactgagtgtctcatcaaaatctttgctttg
aggcaatactacttcaccagtggctggaatttatttgattgtgtgatcgtggtcatttct
attgttagtacaattgtttctgccttgaaaacccaggcacacattcctttccctccaaca
ttcttcagaattgtccgcttggctcggattggccgaatcctgagacttgttcaggcagca
cgaggaatcagaactctccttttcgcgctaatgatgtctcttccctctctattcaatatt
ggccttctactctttctggttatgtttatttatgccatttttggtatgaactgtttttgc
aaagtgaaggaagagtctggaattgatgacatattcaacttcaaaactttcaaaggcagc
atgctctgcctcttccagataaccacgtcggcaggctgggatgccctcctcagccccatg
ttgcaatcaaaagactcatgtaaccccaagtcagagaactgttacctctctgccatagcc
ataacctacttcgtcagttatatcatcatctcctttctcatcgtggtcaacatgtatatt
gctgtgattttagaaaacttcaatatagccactgaagaaagtgaggaccctttgggtgaa
gacgactttgaaatattctacgaagtctgggaaaagtttgacccggaagcaacacaattt
atcaaatattctgctctttctgactttgctgatgcccttcctgagcctctccgtgtggca
aagccaaataaataccaatttttagtcatggacttgcccatggtgagcggagatcgcctt
cattgcctggatatcctgttcgctttcactgctagggtacttggtgagtccagtggcctg
gatagcatgaaagcagtgatggaggagaagttcatggaaaccaaccctttcaagaagtta
tatgaacccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgtaatt
caaaaggcctttcgaaagtacatgatgaagaccaagtgtaccttggaagacaggcctcat
tcacccctccagacactctgcaatggagacttgtccagctctggggtggccgagggcaag
gtccactacgactga
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integrated database retrieval system
