Delphinus delphis (saddleback dolphin): 132432456
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Entry
132432456 CDS
T11117
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ddp04121
]
132432456 (PDZRN3)
Enzymes [BR:
ddp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132432456 (PDZRN3)
Ubiquitin system [BR:
ddp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132432456 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
JmjN
Motif
Other DBs
NCBI-GeneID:
132432456
NCBI-ProteinID:
XP_059878903
LinkDB
All DBs
Position
10:complement(86652352..86899049)
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AA seq
1068 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVATPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQMVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIEGIHQEMEREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEDNKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
GVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPL
AGQRKLTCSQDTLGSSDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSAS
PYGLYYPGSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYREPWM
LHNSGFRNYNTSVDVRRRELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RAAEGVGGPGGEGAAGTTEAYGPSPRNLLSITEDPEVGSPDYSPSPEELDPSQALEGKER
KPSDDGSGSPTPSQKLGGSSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQS
QMSLVSMCKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMT
TDDDAVSELKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNIL
ELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRLYNSFLSVTTV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggatcgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttttgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctc
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctcgacatc
aagtgcgcgcatgcggcgcgcggctgcggccgggtggtcaagctgcaacagctgcccgag
cacctcgagcgctgcgacttcgcgcccgctcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcctctgacgcacggcgagcagcgcgccggcggccac
tgctgcgcgcgggccctgcgggcgcacaacggcgcactgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcaggcaagcgcgagaagtcgctggtggca
cagctggccgccgcccagctggagctgcagatgaccgctctgcgctaccagaagaagttc
accgagtacagcgcacgcctcgactcgctcagccgctgcgtggccacgccgcccggcggc
aagggtgaagaaacaaaaagcctgactcttgtcctgcatcgggactccggctccctggga
ttcaatattatcggtggccggccgtgtgtggacaaccaagatggatcgtccactgaagga
atctttgtatccaaaatagtcgacagtggacctgcagccaaggacggaggcctgcaaatc
cacgacaggattatcgaggttaatggcaaagacttatccagagcaactcatgaccaggct
gtggaagccttcaagacagctaaggagcccatcgtggtccaggtgttgaggcgaacacca
cggaccaaaatgttcacgcctccgtcagagtcacagatggtggacacgggaacccaaacg
gacatcacctttgagcacatcatggctcttaccaagatgtcctcacccaccccacctgtg
ctggatccctatctcttgcccgaggagcatccctcagcccatgaatactacgatccaaat
gactacattgaaggcatccatcaggagatggagagagaggagctggagctggaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcacagtatgctaccggacggac
gatgaagatgacattgggatctatataagcgagatcgaccctaacagcatcgcggccaag
gatgggcgcatccgagaaggagaccgcatcatccagattaacgggatagaggtacagaac
cgcgaagaggccgtggctcttctaaccagtgaagacaacaagaacttttccttgctaatt
gcaaggcccgaactccagctggacgaggggtggatggacgacgacagaaacgactttctg
gacgacctgcacatggacatgctggaagagcagcaccaccaggccatgcagttcaccgcc
ggcgtgctgcagcagaagaagcacgaggaagacgggggaaccacagacacggccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggccggacggacgagagcacgcgcaac
gacgagagctcagagcaggagaacaacggcgacgacgcccccgcggcctccccgccactg
gccggccagaggaagctcacgtgcagccaggacaccctgggcagcagcgacctgcccttc
agcaacgagtccttcatctcggccgactgcgccgacgccgactacctgggcatcccggtg
gacgagtgcgagcgcttccgcgagctgctggagctcaagtgccaggtgaagagtgccagc
ccctacggcctgtactacccgggcagccccctggacgccagcaagagcgacccggagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctc
agcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagtaccgcgagccctggatg
ctgcacaacagcggcttccgcaactacaacaccagcgtcgacgtgcgcaggcgcgagctc
tcggacatcaccgagctccccgagaagtccgacaaagacagctcgagcgcgtacaacaca
ggcgagagctgccggagcaccccgctcaccttggagatgtcccccgacaactctctgagg
cgagcggccgagggcgtcggcggccccggcggcgaaggcgccgcggggaccaccgaggcg
tacgggccgtccccaaggaatctgctctccatcacggaagatcccgaagtgggctctccg
gactacagcccttcccctgaagagctggaccccagccaggccctggagggcaaggagagg
aaacccagcgacgacggcagcgggagccccacccccagccagaagctgggcggcagctcg
tacctgtcgcccttcccgcactccccctacaaacacgcccacatcccggcgcacgcgcag
cactaccagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcaaagc
cagatgagcctggtgagcatgtgcaaggacctgaactcggccaaccagtcggagccgaga
atggagtggaaagtgaagatccggagcgacgggacgcgctacatcaccaagcggccggtg
cgggatcgcctgctgcgggagcgcgcgctcaagatccgcgaggagcgcagcggcatgacc
acggacgacgatgcggtgagcgagctgaagatggggcggtactggagcaaggaggagagg
aagcaacacgtggtgaaggccaaggagcagaggcggaggcgcgagttcatgatgcagagc
cggctcgactgcctgaaggagcagcaaggggccgacgacaggaaggagatgaacatcctg
gaactcagccacaaaaagatgatgaagaagaggaataaaaagatatttgataactggatg
acgatccaagaactcttaacccacggcacgaaatctccagacggcactagactatacaat
tcgttcctatcggtgactactgtataa
DBGET
integrated database retrieval system
