Delphinus delphis (saddleback dolphin): 132432602
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Entry
132432602 CDS
T11117
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2 isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132432602 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132432602 (SKIC2)
Enzymes [BR:
ddp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132432602 (SKIC2)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132432602 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
132432602 (SKIC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
Ski2_N
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
DUF3516
Motif
Other DBs
NCBI-GeneID:
132432602
NCBI-ProteinID:
XP_059879227
LinkDB
All DBs
Position
10:23512171..23522091
Genome browser
AA seq
1250 aa
AA seq
DB search
MMETERIVLPPPDPLDLPLRAVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPVSQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE
KDLLTVPPGFKKGVDFAPEDHPAPAPGLLSLSRLLEPLDLGGGDEDESEAVGQPGGPRRD
TVSASPCSAPLARASSLENLVLQEASTAVAPPEPPKPPPQEQWAIPVDVTSPVDDFYRLI
PQPAFRWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHHLFTGNSPKTQGELFLLLDSRGTFHTKGYYAAVEARKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVHM
LVLFATETFAMGVNMPARTVVFDSTRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVI
LLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSR
KDSKAHEQTLAELTKRLGALEEPDVTGQLVDLPAYYSYGEELTETRSLIQRRIIESVNGL
KSLSAGRVVIVKNQKHHNALGVILQVSSSSTSRVFTTLVLCDKPMSEDPQERGPASPSVP
YPDDLVGFRLFLPEGPCGHTVAKLQPGDVAAITTKVLRLNGEKILEDFSKRQQPKFKKEP
PSAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEAGLRVRKLEELIRGAQCVH
SPCFPAQYLKLRERMQIQEEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEVGTVKL
AGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPSDQLPSTLKQGVE
RVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV
VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgaatcgtgctacctcccccagatcctctggacctgccccttcgg
gccgtagagctgggatgcacagggcgttgggagctgctgaatgtgcctggggctccagag
agcacccttccccacggcctccctccctgtgccccagatctgcagcaagaagcagagcag
ttgtttctgtcatctcccgcctggctgcctctgcacggtgtggaacactcagcccgaaaa
tggcagaggaagatggatccttggtctctcctggccacactgggggccccagtcccctcc
gacctacaggcccaaagacacccaaccacaggccagatactaggctacaaggaggtcctg
ctagagaatacaaacctgtcagccacgacctccttgtctcttcgccggccacccgggccc
gtctcccagtccctgtgggggaatccaacacagtaccctttctggccagggggaatggat
gagcccaccataacagatctgagcactcgagaggaggctgaggaggagatagactttgag
aaagaccttcttactgttccacccggcttcaagaaaggcgtggactttgcaccagaggat
cacccagctccagctcccggcttgctcagcctcagccgtctgctggagcccctggatttg
ggtgggggcgatgaggatgagagtgaggcagtgggacagccaggcggtcccagacgggac
actgtttcagcctctccctgcagtgctcccctggcccgagcaagcagcttggagaaccta
gtgttgcaggaagcgtccacagctgtagctcccccagagcctcccaagcccccgcctcag
gagcagtgggccattcctgtggatgtcacctcccctgtcgatgatttctaccgactcatt
ccccagccagccttccggtgggcgtttgagccagatgtgtttcagaaacaggccatccta
cacttggaacggcatgactcggtctttgttgcggctcacacatccgcagggaagacggtt
gtggctgaatacgccattgcccttgcccagaaacacatgacgcgcaccatctatacttcg
cccatcaaggctctgagcaaccagaagttccgggacttccgaaacacatttggggatgtg
ggactcctcaccggggacgtgcagctgcacccagaggcctcctgcctcattatgacaaca
gagatccttcgctccatgctgtacagtggctcggatgtcatccgagacctggagtgggtc
atctttgatgaggttcactacatcaacgatgctgagcgtggagtcgtgtgggaggaggtg
ctcatcatgcttcctgaccacgtctccatcatccttctgagcgctactgtccccaacgcc
cttgaatttgctgactggattgggaggctgaagcgtcgccagatctacgtgatcagcact
gttgctcgcccagtccccctagagcatcatctcttcacggggaacagccccaagacccag
ggggagctcttcctgctgctggactcccgaggcaccttccacacaaaggggtactacgcg
gctgtggaggccaggaaggagcggatgagcaaacacgcccagacctttggggccaagcag
cccacgcatcagggggggcctgcacaggaccgtggcgtgtacctgtccctcctggcctcc
ctccgcacccgtgcgcagctgcccgtggtggtgttcaccttctcccgtggccgctgtgat
gagcaggcctcgggcctcacctcccttgacctcaccacgagttcagagaagagtgagatt
cacctcttcctgcagcgctgcctcgctcgcctccgaggctctgaccgccagctgccccag
gttctgcacatgtctgaactcctgcaccgcggcctgggtgtgcaccacagcggcatcctg
cccatcctcaaggagatcgtggagatgcttttcagccgtggcctggtcaaggtgcacatg
ctggtcttgtttgccacggagaccttcgccatgggtgtaaatatgccagcccggacagtg
gtgtttgactccacgcgtaagcacgatggctccaccttccgggacctgctccctggggag
tatgtgcagatggcgggccgggcgggccggaggggcctggaccccacgggcaccgtcatc
ctgctctgcaagggccgtgtgcccgagatggcggacctgcaccgcatgatgatggggaag
ccgtcccagctgcagtcccagttccgcctcacgtacaccatgatcctcaacctgctgcgg
gtggatgccctcagggtggaggacatgatgaagaggagcttctctgagtttccatcccgc
aaggacagtaaggcccatgaacagactctggctgagctgaccaagcggctgggggccttg
gaggagcctgatgtaactggccaactcgttgacctgcctgcctattacagctacggggag
gaactgacagagacccggagcctgatccagcgacgcatcatagagtctgtgaatgggctg
aaatctctctcagcgggaagggtggtgattgtgaagaaccagaagcatcacaacgcactg
ggtgtgatccttcaggtctcctcgagctccaccagcagagtattcacgactctggtcttg
tgtgataagcccatgtctgaggacccgcaggagagggggccagcctcccccagtgtgccc
tacccagatgacctcgtgggattcaggctgttcctgcctgaagggccctgtggccacact
gtggccaagctccagccaggagatgtggctgccatcaccaccaaggtgctccggctgaac
ggggagaagatcttggaggacttcagcaagaggcagcaaccaaaattcaagaaggagcct
ccctctgcggccgtgacaactgctgtccaggaactactacgtctggctcaggcccaccca
gcaggaccccctacccttgaccctgtcaatgacctgcagctcaaggatgtgtcggtggta
gaggcggggctccgggtccggaagctggaggagctgatccggggggctcagtgtgtacac
agtccctgtttccctgcccagtacctgaagctgcgggagcggatgcagatacaggaggag
atggagcggctgcgcttcctgctgtcggatcagtcgcttctgctgctccctgagtaccac
cagcgagtagaggtgctccgaaccctggggtacgtagatgaagtgggcaccgtgaagctg
gcagggcgggtggcttgtgccatgagcagccatgagctgctcctcactgaactcatgttt
gacaacgcgctgagcgcccttcggcccgaggagatcgcggccctgctctccggcctggtc
tgccagagccccggggaccctagtgatcagctcccaagcacccttaaacagggggtggaa
cgtgtccgggctgtggccaagcggatcggtgaggtgcaggtggcctgtggcttgaaccag
acagtggaggaatttgtgggagagctgaattttggcctggtcgaggttgtgtacgagtgg
gcccggggcatgcccttctctgagttggcagggctctcggggacccccgagggcctggtg
gtccgctgcatccaacgcctggccgagatgtgtcgctcgcttcggggggcggcccgcctg
gtgggcgagcctgtgctaggtgccaagatggagacggcagccaccctgctacggagggac
atcgtctttgcagccagcctctacacccagtga
DBGET
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