Delphinus delphis (saddleback dolphin): 132434922
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Entry
132434922 CDS
T11117
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp01524
Platinum drug resistance
ddp03430
Mismatch repair
ddp05200
Pathways in cancer
ddp05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132434922 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132434922 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
132434922 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
132434922 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132434922 (MSH2)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132434922 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
132434922
NCBI-ProteinID:
XP_059882652
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All DBs
Position
12:complement(51571437..51644008)
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AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPAGAKTVESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGSKASKENDWYLA
FKASPGNLAQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDVGKLRQVIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAVSSLCAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISAARELGLDPGKQIKLDSNTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQVFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATRIRAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQEHDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENIVMKLKQLKAEVIAKNNCFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaagagacgctgcagctggagagtgcggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccgggaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaaatacatgggaccggcaggagcaaagactgtggagagtgttgtactt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaacagagctggaagtaaggcctccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatcttgctcagtttgaagacattctctttggtaacaacgat
atgtcagcttccattggtgttgtgggtgttaaaatgtctacagttgatggccaaagacag
gttggagttgggtatgttgactccatacagaggaagctaggactgtgtgagtttcctgat
aatgatcaattctccaatctggaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacgtgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaaaagctgacttttccacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtgttgccagaa
atggagaatcaggttgcagtttcttcattgtgtgcagtaatcaagtttctagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttccgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccaatggattaagcagcctctcatggacaagaacagaatagaagagagatta
aatttagtcgaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttatcgactctatcagggtataaatcaactccctaatgttattcaggct
ctggaaaaatatgaaggaaaacatcaggcattgttgttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagatgcagtcaacattaataagtgcagct
agagaactaggcttggatcctggcaaacagattaaactggattccaacacacaatttgga
tattattttcgtgtaacatgcaaggaagaaaaagtccttcgtaataataaaaatttcagt
acagtagatatccagaagaatggtgttaaatttacgaacagtaaattgacttctctcaat
gaagagtataccaaaaataaaaccgaatatgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccgatgcagacactaaatgatgtgttagct
cagctagatgctgttgtcagctttgctcacgtgtccaatggagcacctgttccatatgta
cggccggtcattttggagaaaggacaagggagaattatactgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacaggtgttccacatcattactggtcccaacatgggaggtaaatcaacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccatcgtggactgtatcttggcccgggtaggggctggtgacagtcagttgaaa
ggagtctccacattcatggctgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacctatgacggattt
gggttagcgtgggctatatcagagtacattgcaacaaggatccgtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcatgttgccgagcttgctaatttccccaggcatgta
atagagtgtgctaaacaaaaagccctggaactagaggaatttcagaatattgggaaacca
caggaacatgatgaaatggaaccagccgcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagagtttttatccaaggtgaagcaagtgccctttactgaaatgtca
gaagaaaacatcgtaatgaagttaaaacagctgaaagctgaagtgatagcaaagaataat
tgttttgtaaatgaaataatttcaagaataaaggtaactacatga
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