Delphinus delphis (saddleback dolphin): 132436054
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Entry
132436054 CDS
T11117
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03082
ATP-dependent chromatin remodeling
ddp03250
Viral life cycle - HIV-1
ddp04714
Thermogenesis
ddp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132436054 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132436054 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
132436054 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132436054 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ddp01009
]
132436054 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddp03021
]
132436054 (SMARCB1)
03036 Chromosome and associated proteins [BR:
ddp03036
]
132436054 (SMARCB1)
Protein phosphatases and associated proteins [BR:
ddp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132436054 (SMARCB1)
Transcription machinery [BR:
ddp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132436054 (SMARCB1)
SWI/SNF complex
132436054 (SMARCB1)
Chromosome and associated proteins [BR:
ddp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132436054 (SMARCB1)
PBAF complex
132436054 (SMARCB1)
SWI/SNF complex
132436054 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
132436054
NCBI-ProteinID:
XP_059884456
LinkDB
All DBs
Position
13:complement(25401572..25428579)
Genome browser
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcctgtcaagttccagctggaa
gacgacggcgagttctacatgatcggctctgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcgctctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tacacgaccctggccaccagcgtaactctgttaaaagcctccgaggtggaagagattctg
gatggcaacgatgagaagtacaaggccgtatccatcagcacggaaccccccacctacctc
agggaacagaaggctaagaggaacagccagtgggtgcccaccctgcccaacagctcccac
cacctggacgccgtgccctgctccaccaccatcaacaggaaccgcatgggccgggacaag
aagaggacgttcccgctgtgctttgacgaccacgacccagctgtgatccatgagaacgcg
tcccagcccgaggtgctggttcccatccgactggacatggagatagacgggcagaagctg
cgggacgcctttacctggaacatgaacgagaagctgatgacccctgagatgttttcagaa
attctctgtgatgacctggatttgaacccactgacgttcgtaccagccatcgcctccgcc
atcagacagcagatcgagtcctaccccacagacagcatcctggaggaccagtcagaccag
cgtgtcattatcaagctgaacatccacgtgggaaacatctccctggtggaccagttcgag
tgggacatgtcagagaaggagaactcgccggagaagtttgccctgaagctgtgctccgag
ctggggctgggcggggagttcgtcaccaccatcgcgtacagcatccggggacagctgagc
tggcatcagaagacctacgccttcagtgagaaccccctgcccacggtggagattgccatc
cggaacacaggcgacgctgatcagtggtgcccactgctggagaccctaacagatgccgag
atggagaagaagatccgcgaccaggacaggaacacaaggcggatgaggcgtctggccaac
actgccccggcctggtaa
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