Delphinus delphis (saddleback dolphin): 132437214
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Entry
132437214 CDS
T11117
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132437214 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132437214 (PNLDC1)
Enzymes [BR:
ddp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
132437214 (PNLDC1)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132437214 (PNLDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
132437214
NCBI-ProteinID:
XP_059886460
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All DBs
Position
14:complement(8003249..8022456)
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AA seq
581 aa
AA seq
DB search
MLGSRYSLGPSLVQVERGGLACPCFSFLCSPFLTSPGLLSSKKVSQNFCHQQRLQHKEPC
DGLRLGTLVFLASPAGLDIEFTGLRSNPSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIG
LSMFSSIEGESNKYEAHSCNFFLFPTTFGILDSEFSFQASSVQFLNEHGFDYNKFLKNGI
PYMNEEQEKKIKHSILTGNWRVRSSLDKDQIKVVIDEVTRWLDLAEEGDWMTLPGITGFQ
AFEVQLVLRKALPDIWTVMRGQGVTVKKVSKRHRWYLENTSCDRESCWQEKILLSARGFS
VFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYEEFKVNIHNLFPVLIDTKSVAKD
IWKELNFPRVSSLLEVYEVLNSDLNPTKNSGPVIIHASKCEKYVETKYPHEAAYDAFLCG
SVLLKVAHLLLWRAHGVLPIPKPSFPLYLDVLAPYVNQVNLIRAGVPKINFSGPDYPSIR
PPILIVTVRRWPGVSEQQVYREFQNLCKFDVRRLVGSHFLLLTNKFKDTRSILKEYRCHP
TLQVSVYRYWRHSPNVSCLLQVCGVVTTWAFIAFLLGGARP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcagcaggtacagccttggccccagtttggtccaggtggaacggggtggcctg
gcttgtccttgctttagcttcctctgttctcccttcttgacctctcctggcctcttgagc
agcaagaaggtgagccagaacttttgccaccagcagcgtttacagcacaaagagccttgc
gatggcctgcgcctggggactcttgtctttcttgcctcccctgcaggtctagacatagag
ttcactggccttcgttctaacccgtccgggccccagcagatcagtctgtttgacttgcca
tcagagtggtatctcaagacccgtcagagtgttcagcagttcaccgtctgtcagattgga
ttgtctatgttttccagtattgaaggcgagtcaaacaagtatgaagcccattcgtgtaac
ttctttctcttccctacaacgtttgggattttggattcagagttctctttccaggcttct
agtgttcagtttttgaatgagcatggcttcgattataacaagtttctcaagaatggaatc
ccatatatgaacgaagaacaggagaagaaaattaaacacagcatcctgactgggaactgg
agagttcgcagttctctggataaagaccaaatcaaggtggtgattgacgaggtgacgcgc
tggctggacctggcagaggaaggcgactggatgaccctccctggtatcaccggcttccag
gccttcgaggtccagcttgtgctgaggaaggccctccccgacatctggacggtgatgaga
ggccagggggtgacagtgaagaaagtgagtaaacggcatcgctggtatcttgagaacacc
tcttgcgatcgagaaagctgttggcaggagaagattcttctctctgcgaggggtttttct
gtgtttttccagatgctggtgaaagcccagaagcccttagtgggacataatatgatgatg
gatctgctgcatctccatgagaagttcttcagacctctcccagaaagctatgaagaattt
aaggtgaatatccacaacctatttcctgttctcattgacaccaaaagtgtggccaaggat
atctggaaggaactgaatttcccaagggtttcaagtcttttagaagtttatgaagtccta
aacagtgacttgaatcccaccaagaattctgggccagtgattattcacgcaagcaaatgt
gaaaaatacgttgagacaaagtatccccatgaagcagcatacgatgccttcctgtgcgga
tcagttcttttgaaagtggcccacttgctcctatggagagcgcacggggttcttcccatc
cccaagccctccttcccgctgtacctcgacgtgctggctccctatgtgaaccaggtgaat
cttatccgagccggggtccccaagatcaatttttcgggtccagattaccccagtatccgc
cctcccatcctcattgtcaccgtcaggaggtggcccggggtcagcgagcagcaagtctac
cgcgagtttcagaacctctgcaagtttgacgtcagaagactggtggggagccacttcctg
cttctgaccaataagtttaaggacacccggagcatcctgaaggagtacaggtgccacccc
accctgcaggtctccgtgtaccgctactggagacactccccaaacgtcagctgcctgtta
caggtctgtggcgtagtcaccacctgggcctttatcgcgtttctcctgggaggagctcgc
ccctga
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