Delphinus delphis (saddleback dolphin): 132437394
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Entry
132437394 CDS
T11117
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04151
PI3K-Akt signaling pathway
ddp04510
Focal adhesion
ddp04512
ECM-receptor interaction
ddp04820
Cytoskeleton in muscle cells
ddp04974
Protein digestion and absorption
ddp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132437394 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132437394 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132437394 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132437394 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132437394 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132437394 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ddp00535
]
132437394 (COL9A1)
Proteoglycans [BR:
ddp00535
]
Extracellular matrix (ECM) proteoglycans
Others
132437394 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Toxin_R_bind_N
Laminin_G_1
Laminin_G_3
DUF4882
Motif
Other DBs
NCBI-GeneID:
132437394
NCBI-ProteinID:
XP_059886624
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All DBs
Position
14:81466286..81550056
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AA seq
925 aa
AA seq
DB search
MKNFWKIPFLFFVCSFVGPWASATVKRRPRFPVNSNANGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRKAIQRVVGSTALQVAYKLGKKVDFRIPTRQLYPSGLPEEYSFLTTFRMT
GSTLEKNWSVWQIQDSSGKEQVGVKINGETKSVAFSYKGLDGSLQTVTFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCQELPTRVTPSETTDLRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGEPGKPGAPGKPGTPGADGLTGPNGSPGSVGPRGQKGEPGLPGPRGFPGRGIP
GPPGPPGGAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPSSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGIGQVGAQGPPGAQGLRGIAGITGAK
GEKGARGLDGEPGPQGLPGAPGDQGRRGPLGETGPKGDRGAQGSRGIPGLPGSKGDTGLP
GVDGRDGIPGMPGTKGELGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGRQGPPGEVGLRGPRGLPGSRGEEGPVGPPGLPGKLGSLGRPGFPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGELGGRGELGDIGLPGPKGSAGSPGEPGLRGPEGSR
GLPGVEGPQGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIREHFAEMAAS
LKRPDFGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGLRGAKGDMGER
GDRGPPGRGPKGLPGTSGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTVQAGQRAFNSKGPDPSKA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaatcccatttctcttctttgtatgcagctttgtgggaccttgg
gcatccgcaactgtcaagcgccgcccaaggttccctgttaattcaaatgctaatggtgaa
aatgaactctgtccaaaggtcaggattggacaagatgatttaccagggtttgacctgatt
tctcagttccagatagataaagccgcatctagaaaagctatccagagggtagtggggtcc
actgcattacaagtggcttacaaactgggaaagaaggtagacttcaggattccaaccagg
caattatatcccagtgggctgcctgaagaatactcctttctaaccacttttcggatgact
ggaagcacacttgaaaagaactggagcgtttggcagattcaagattcctcggggaaggag
caagttggcgtgaagattaatggcgaaacaaaatctgttgcgttttcgtacaagggactg
gacggaagtctccaaactgtgaccttttcgaatttgccctccttgtttgattcccagtgg
cataagatcatgattggcgtggaaaggagcagtgcgactctttttgttgactgcaacagg
atcgagtccttacctataaagccaagaggccagatcgatgtcgatggctttgctgtgctg
ggaaaacttgtggataatcctcaagtttctgttccgtttgaactccagtggatgctgatt
cattgtgacccactgcgacccaggagagaaacttgccaggagctgccaacgagggtaaca
cccagcgagaccaccgacctgaggggacccccgggtgagcagggtcctccggggccgccg
ggcccccctggagtcccgggcatcgacggcatcgacggtgaccgaggtccgaagggtccc
ccgggccccccgggccccccgggagagccgggaaagccgggagctccgggcaaacctggc
acgccgggcgcagacggattaacgggacctaatggatctcctggctctgttggaccgaga
ggacagaaaggagaacctggcctgccgggacctcgtggatttccaggccgtggtatccct
ggacctcctggtcctcctgggggagcaggcctccccggagagcttggccgtgttggacca
attggtgaccctgggagaagaggaccaccgggcccccctggtcccccgggacccagcgga
acaattggctttcatgacggagatccattgtgtcccagttcctgtccaccgggccgctct
ggatatccaggcctgccgggcatgaggggtcataaaggggctaaaggagagattggtgaa
cctggaagacaaggtcacaagggtgaagaaggagaccagggcggaattggacaggttgga
gctcaaggacctccgggagctcaaggtttgagaggcatcgctggcataactggggccaaa
ggggaaaaaggcgctcggggcttagatggagaacccggaccacaaggtctccctggtgca
cctggtgatcaagggcggcgaggacctctaggagaaacaggtcccaagggagacagaggg
gctcaaggttctcgaggaattcctggtctccctgggtccaagggcgacacgggcttgcca
ggtgtggacggccgggatgggatacctggaatgccgggaacaaagggtgaactagggaaa
cctggacctcctggggaagcagggttgcaggggttacctggtatacctggaattcctggc
gcaaagggtgttgccggtgaaaagggtaacacaggtgctccagggaagcccggtcaactg
gggaattcaggcaaaccgggccgccaggggccaccaggagaggtgggactccgaggacct
cggggcctccctggcagtagaggtgaagaaggaccagtaggacccccaggactaccaggt
aaactgggttctctcggcagacctggcttccccggcttgcctggcccccctggacttcct
ggaatgaaaggtgacaggggcgtagttggtgaacctggtccaaagggtgaacagggtgcc
tctggtgaagagggagaactgggaggaaggggtgaactgggagatataggattacctggc
ccaaagggatctgcaggtagccccggggagcctggcttgaggggacccgaaggaagccgg
gggcttcctggggtggaaggaccacaaggaccccctggcccgcgaggcgtgcagggagaa
cagggcgccaccggcctgcctgggatccagggccctcccggcagagcacccaccgatcag
cacattaagcaggtttgcatgagagtcattcgagagcattttgctgagatggctgcaagt
ctcaagcgtccggacttcggagcctcgggcctccccgggcggcctggcccccctggtccc
ccaggcccccctggagagaacggcttcccaggccagatgggacttcgaggcctcccgggc
atgaagggcccccccggggctcttggtttgaggggagcgaaaggtgacatgggggaaaga
ggtgatcgtggacccccaggaagaggtcccaaaggtttgcccgggacttcaggtctccca
ggtgacccaggtcctgccagctacgggaggaatggccgggatggtgagcgaggcccccca
ggggtggcaggcatccctggtgtacccggccccccgggacctcctggccctcctggtttc
tgcgagccagcctcctgcaccgtacaggctgggcagcgggcatttaatagcaaaggtcca
gatccatcaaaggcttag
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