Delphinus delphis (saddleback dolphin): 132437823
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Entry
132437823 CDS
T11117
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03008
Ribosome biogenesis in eukaryotes
ddp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132437823 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
132437823 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddp03021
]
132437823 (XRN2)
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132437823 (XRN2)
03009 Ribosome biogenesis [BR:
ddp03009
]
132437823 (XRN2)
03016 Transfer RNA biogenesis [BR:
ddp03016
]
132437823 (XRN2)
Transcription machinery [BR:
ddp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132437823 (XRN2)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
132437823 (XRN2)
Ribosome biogenesis [BR:
ddp03009
]
Eukaryotic type
Pre-60S particles
RNases
132437823 (XRN2)
Transfer RNA biogenesis [BR:
ddp03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
132437823 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
132437823
NCBI-ProteinID:
XP_059887275
LinkDB
All DBs
Position
15:complement(45311490..45392178)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECSGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVKEEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPSFSPGGILTPHALGSRNSPGSQVAHNPRQAAYEMRMQNNSSPSVSPNASF
TSDGSPSPRGGIKRKVEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMASDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAVDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFLLELYKTGSTESVDVPPELCHGIQG
KFSLDEEAILPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYVFKAIMLPGARKPAPV
LKPGDWEKSSNGRQWKPQLGFNRDRRPVHLDPAAFRALGHVMPRGSGTGVYSNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTP
NAAFQPNQYQMLAGPGGYAPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttctttcgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcagtggtgtaaagatccctgtggatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccgaaaaacgaggatgaaatgatggttgca
atctttgagtacattgacaggcttttcaatattgtaagaccaagacggcttctgtacatg
gcaatagatggagtggcgccacgcgctaaaatgaaccagcagcgttcaaggaggttccga
gcatccaaagaaggaatggaagcagcagtagagaagcagcgagtcaaggaagaaatactg
gcaaaaggtggctttcttcctccagaagaaataaaggaaagatttgacagcaactgcatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgacccagggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggggaacataaaatcatggattacattagaagacaaagagcccagcctaac
cacgacccaaacactcatcattgcttatgtggagcagatgctgatctcattatgctcggc
cttgctacacatgagcccaactttaccattatcagagaagaattcaaaccaaacaaaccc
aaaccctgtggtctttgtaatcagttcggacatgaggtcaaagactgtgaaggtttgccg
agagaaaagaagggaaagcacgatgaactggcagacagtcttccttgtgcagaaggagag
tttatcttccttcgtctcagtgttcttcgtgagtatttggaaagagagctcaccatggcc
agcctgccattcacatttgatgttgagaggagcattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcacctgccgtccttagagattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcagagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccatctttctctcctggtggaatattaacccct
catgcccttggttcaagaaactcaccaggatctcaagtagcccataatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtgtctcctaatgcgagtttc
acttctgatggctccccatctccgagaggaggaattaagcgaaaagtggaagacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggttggaaacagcggtac
tacaaaaacaaatttgatgttgatgcagctgatgagaaattccgacgtaaagttgtgcag
tcttacgttgaaggactctgctgggttcttcgatattattaccagggttgtgcgtcctgg
aagtggtattatccattccattatgcaccattcgcttcagactttgaaggtattgcagat
atggcttctgattttgagaagggtaccaaaccgtttaaaccactggaacaacttatgggg
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctacccagaagattttgctgttgatttgaatgggaag
aagtatgcatggcaaggtgtggctctgttgccgttcgtggatgagcgaagactgcgagct
gccctggaagaggtgtacccggacctcacccccgaagagactagaagaaacagtcttgga
ggtgatgtcttatttgtggggaaacatcacccactgcacgacttccttttagagctgtac
aagacaggttccacagagtcagtggatgtaccacctgaactatgccatgggattcaagga
aagttttctttggatgaagaagccattcttccagatcaaatagtatgttctcctgttccc
atgttaagggatctgacacagaacgctgcgatcagtattaattttaaagacccacagttt
gctgaagattacgtttttaaagccataatgcttccgggagcaagaaaacctgcaccggta
ctgaaacctggcgactgggagaaatccagcaatgggcggcagtggaagccccagctcggc
tttaaccgggaccggcggcccgtccacctggatccagcggccttcagggctttgggccat
gttatgcccagaggctctggaactggagtttacagcaatgctgcaccaccacctgcgact
taccagggaaacttgtaccggccactgttgagaggacaagcccagattccaaagcttatg
tcaaatatgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaaaga
tttgacagaggcgttggggccgaacctctgctgccatggaaccggatgctccaaacccca
aacgcagccttccagccaaaccagtaccagatgctcgccgggccgggcgggtatgcaccc
agacgtgatgatcgcggcgggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccttcaggaagatacagttggaattag
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