Delphinus delphis (saddleback dolphin): 132438003
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Entry
132438003 CDS
T11117
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04612
Antigen processing and presentation
ddp05145
Toxoplasmosis
ddp05152
Tuberculosis
ddp05164
Influenza A
ddp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
132438003 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
132438003 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
132438003 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
132438003 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
132438003 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ddp01001
]
132438003 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ddp04054
]
132438003 (CIITA)
Enzymes [BR:
ddp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132438003 (CIITA)
Protein kinases [BR:
ddp01001
]
Serine/threonine kinases: Other
TAF1 family
132438003 (CIITA)
Pattern recognition receptors [BR:
ddp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132438003 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
132438003
NCBI-ProteinID:
XP_059887726
LinkDB
All DBs
Position
15:57820875..57860252
Genome browser
AA seq
1129 aa
AA seq
DB search
MRCLATRPAGSYLPEPQGSGQHTTMELGPLEGGYLELLNSNADPLHLYHLYDRMDLAGEE
ELELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFI
EHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAEPLAMPVVTGAFLVGLVS
ESSAQPCPSPPALFNKEPAPSQTRLEDTVPPSSSLLSCLSLPAGPIQIIPTLSTLPQGLW
QISGAGTGVSSILIYQGEMPQASQTPASSSTAVHSLPKSPDRPGSTSPFAPSAADLPSMP
EPALTSRTNLTEDEMSPTQCPAAHEASSKLPKWPESVEQFYCSLRNKYQAKPAGPEGILV
EVDLVRVRLERSGGKSQDRELTTLDWAERQPARGSLGEVLLASSNHRRPRETQVIAVLGK
AGQGKSHWVQAVSWAWACGQLPQYDFIFCIPCHCLDRPGDTYRLQDLLFSLGSQPLSVDD
EVFSYILRRPDRILLILDAFEELEAQDGFLHSAGGPTSAEARSLRGLLAGLFQRKLLRGC
TLLLTARPRGRLAQSLSKADALFEVAGFSAQQAETYVMRYFECSGTTEHQKRALALLQSQ
PFLLSHSHSPTVCRAVCQLLEALLELGDEAQLPSTLTGLYVGLLGPGARDSPPGALVGLA
KLAWELGRGHQSSLREGQFPSAEVRVWAVAQGLVQPTPGAPETKLAFSSFLLQCFLGAMW
LALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRACCLGALAGLAGSTS
AVRKQEVLTRYLKRLQPGALKAGRLLELLHCAHEALDAGLWQHVLQGLPAHLSFLGTRLT
PPDTYVLGSALEAAGRDFSLDLRSTGVDPSGLGSLVGLSCVTHFRAALSDTVELWESLQQ
HGEAKLLRAVKEKFTIEPFKAESMKDVEDLGNLVQIQRTRSSSEDTPGELPAIRDLKKLE
FALGPILGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLN
LSQNNITDLGACKLAEALPLLAASLLRLSLYNNCICDAGAESLAHVLPDMVSLRVLDVQY
NKFTAAGAQQLTASLRKCPHVEKLAMWTPTIPFGVQEHLQQLDSRIILR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctacgcgcccagccgggtcctacctgccagagccccaaggcagtgga
cagcacacaaccatggagttggggcctctagaaggtgggtacctggagcttctcaacagc
aatgctgaccctttgcatctctaccacctctatgaccggatggacctggctggagaagaa
gagctagagctctgctcagaacctgatacggacaccatcaactgcgaacagttcagcagg
ctgttgtgtgatatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaa
ctggaccagtatgtcttccaggattcccagctggagggcctgagcaaagacattttcatc
gagcacataggactggaagaaatgatcagcgagagtgtggaggtgctggaggaagcagga
cagaaaagtcagaaaagacccttcccagaggagctgcctgtggatctgaagcacaggaaa
ctagctgagcccctagccatgcccgtggtgaccggtgctttcctggtggggctagtgagt
gaatcttcagctcagccctgcccgtcaccacctgctctgttcaacaaggagccagcaccc
agccagacccggctggaggacaccgtgcccccttccagttccttgttgagctgcctgagt
ctccctgctggacccatccagatcatccccactctctccactctgccccaggggctctgg
caaatctcaggggctgggacaggggtctccagtatactcatctaccaaggtgagatgccc
caggccagccaaacacctgcctccagcagcacagctgtccacagcctcccaaagtcccca
gaccggcccggctccaccagcccctttgccccatcggcagctgacctccccagcatgcct
gaaccagccctgacctcccgcacaaacctaacagaggatgagatgtcccccacccaatgc
ccagcagctcacgaggcatccagcaagcttcccaagtggcctgagagtgtggaacaattc
tactgctcgctacggaacaagtaccaggctaagcccgcaggcccagaaggcatcctggtg
gaggtggacctggtgagggtaaggctggagaggagcggcggcaaaagccaggacagagag
ctgaccaccctggactgggcagagcggcagccggcccgaggaagtctgggcgaggtgctg
ctggcctctagcaaccaccggcggccacgtgagacgcaggtgatcgccgtgctgggcaaa
gcaggacaggggaagagtcactgggtccaggccgtgagctgggcctgggcctgcggccag
ctgccacagtacgactttatcttctgcatcccctgccactgtttggaccgtccgggggac
acctaccgcctgcaggatctgctcttctccctgggttcacagccactgtcagtggacgac
gaggtcttcagttacatcttgaggaggcccgaccgcattctgctcatcctggatgccttc
gaggagctcgaagcccaagacggcttcctgcacagtgcgggcggacccacgtcggcagaa
gcccgctccctccgggggctgctggcgggcctcttccagcgcaagctgctgagaggctgc
accctgctgcttacagcccggccccggggccgcctggcccagagcctgagcaaggccgac
gctctgttcgaagtggccggcttctccgcccagcaggccgagacctatgtgatgcgctac
tttgagtgttcggggaccaccgagcaccaaaagagagccctggcgctcctccagtcccag
ccatttctcctgagtcacagccatagccccactgtgtgccgggccgtgtgccagctcttg
gaggccctcctggagctaggtgatgaggcccagctgccttccacgctcacgggactctat
gttggcttactaggcccaggagcccgtgacagccccccaggggccctggtgggactggcc
aagctggcctgggagctgggccgcggtcaccagagcagcctgcgggagggccagttccca
tcggccgaggtgagggtctgggctgtggcccaaggcttggtgcagcccaccccgggggcc
ccggagaccaagctggccttctccagcttccttctgcaatgcttcctgggcgccatgtgg
ctggctctgagcagcgaaatcaaggacaaggagctgccgcagtatttggcattgaccccg
aggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggttgggctg
gtcttccagcctcgtgcctgctgcctgggagccctggcagggctggcgggctccacctca
gcggtcaggaagcaggaggtgctcaccaggtacctgaagcggctgcagcctggggcgctg
aaggcggggcggctgctggagctgctgcactgcgcccacgaggcgctggatgccgggctt
tggcagcatgtgctgcaggggctcccggcccacctctcattcctgggcacccggctcaca
cctcccgacacctacgtgctgggcagcgccttggaggcggcgggccgagacttctccctg
gacctccgcagcactggcgttgacccctctggactggggagcctcgtgggactcagctgt
gtcacccatttcagggctgccttgagtgacacagtggagctgtgggagtccctacagcag
catggggaggccaagttactccgagcagtgaaggagaagttcaccattgagcctttcaag
gctgaatccatgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacaaga
agttcctctgaagacacgcctggggaactccctgccatccgagacttaaagaagctggag
tttgcgctgggccccatcttgggccctcaggcttttcccaaactggtgaagatccttgag
gccttttcttcccttcagcatctggacctggactcactgagtgagaacaagatcggggat
gagggtgtcgcccagctctcggccaccttccctcagctgaaggccctggagacgctcaat
ttgtcccagaacaatatcactgacttgggtgcctgcaagctggcggaggccctgcccttg
ctggctgcgtccctcctcaggctgagcttgtacaataactgcatctgcgatgcgggagct
gagagcctggcacacgtgcttccagacatggtgtccctccgggtgctggatgtccagtac
aacaagttcacagctgccggggcccagcagctcactgccagcctgagaaagtgccctcac
gtggagaagctggcgatgtggacgcccaccatcccttttggcgtccaggaacacctgcag
cagctggactcaaggatcatcctgagatga
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