Delphinus delphis (saddleback dolphin): 132438351
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Entry
132438351 CDS
T11117
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03430
Mismatch repair
ddp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132438351 (PMS2)
03460 Fanconi anemia pathway
132438351 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132438351 (PMS2)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132438351 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
132438351
NCBI-ProteinID:
XP_059888449
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Position
15:complement(83092532..83119014)
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AA seq
865 aa
AA seq
DB search
MEQADVPSSELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDASATNIELRLKD
YGAELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
FSKMVQVLHAYCIISAGVRVSCTNQVGQGKRQPVVCTSGGSSMKENIGSVFGQKQLQSLI
PFVQLPPSDTVREEYGLSSSQALQNLFCISGFISHCAHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEIYHMYNRHQYPFVVLNISVDLECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDNDVNKLNVSQQPLFDVEGHLIKRHSAEVEKPVPEKQDDPAPLRTRGEEKRAVTISR
LREAFSLRHTVENKSRGPKATDPRRISPRQKSSTPLPSASRPLCSWKHISEPREEGVPST
QGPCDPMGRVDTEEGWGHSSASAGSEEGSSTPKTGSQPSSDHVASSPKDGFSQENVESLE
KLPETDDRLSGTNCHLDHEESSSRARVSLQPTQLSSPNAKRFRKEGVPLNPDVPPESMKT
QNASAPEVDVAVEINKKIVPLDFSMSSLAKRIKQLCQQEQQQEGGQNYRKFRAKICPGEN
QAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTV
LQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEGAPVTQRAKLISLPTSKSWT
FGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEM
DHPWNCPHGRPTMRHIANLDIISQN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagccgacgtgccgagttcagaacttgctaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgttctgggcaagtggttcttagtctaagcactgctgtgaag
gagttggtggaaaatagtgtggatgccagtgccactaacattgagctcaggcttaaagac
tatggggcggagctcattgaagtttcagacaatggatgcggggtagaagaagaaaacttt
gaaggcttaactctgaagcatcacacttctaagattcaggagtttgctgacctcactcag
gttgaaacttttggctttcggggggaagctctgagctcactctgtgcactgagtgatgta
actatttctacctgccacacatctgcgaaggttgggactcgactggtgtttgatcacaat
ggaaaaatcctccagaaaaccccctacccacgacccagagggacgacagtcagcgtgcag
cagttattttatacgctacctgtgcgccataaggagtttcaaaggaatattaaaaaggag
ttctccaaaatggtccaggtcttacacgcctactgtatcatttcagcgggcgtccgtgta
agttgcaccaatcaggttggacagggtaagaggcagcctgtggtgtgcaccagtggaggc
tccagcatgaaggaaaatatcggatctgtatttgggcagaaacagttgcaaagcctcatc
ccttttgtgcagctgccccctagtgacactgtccgtgaagaatacgggctgagctcttcc
caggctctgcagaacctgttttgtatctcaggttttatttctcactgtgctcacggcgtg
ggaagaagttcaacggacagacagtttttctttatcaatcggcggccttgtgacccagca
aaggtttccagacttgtgaatgagatctatcacatgtataaccggcatcagtatccattt
gttgttcttaacatttctgttgatttggaatgtgtcgacatcaacgttactccagataaa
aggcaaattttactacaggaggagaagcttttgttggcagttttaaagacgtctttgata
ggaatgttcgataatgatgttaacaagctcaacgtcagtcagcagccgctgtttgacgtc
gaaggtcacttaataaaaaggcattcggcagaggtggagaagcccgtgccagagaagcag
gatgatcccgccccattaaggactcgcggggaagagaaaagggcagtgaccatttccaga
ctgagagaggccttttcccttcgtcacacagtggagaacaagtctcggggtccgaaggcc
accgacccaagacggatttctccacgacagaaaagcagcaccccacttcctagcgcttca
aggcccctctgctcctggaagcacatctctgaacctcgggaggaaggggtgccttccact
caggggccctgtgacccgatgggcagagtggacacggaggagggctgggggcacagcagc
gcatctgccggctctgaggaggggtccagcaccccaaaaacgggcagccagcccagcagt
gaccatgtggcaagctcccccaaagatgggttttcgcaagaaaatgtggagtctttggag
aagttacctgaaacggacgatcgtctttcgggcacgaattgccacttagaccacgaagaa
agcagctcccgagctagagtttcgctgcagccaactcagctctcatccccaaacgcaaag
cgttttagaaaagaaggggttcctttaaatcccgatgtccctccagagtccatgaaaact
cagaacgcttcagcgcccgaggtggatgtagctgttgaaattaacaagaaaatagtgccc
cttgacttttctatgagctctttagccaaacgaataaagcagttatgtcagcaagaacag
caacaagaaggtggacaaaattataggaagtttcgggcaaagatttgccctggagaaaat
caagcagcagaagatgaactaagaaaagagataagcaaaacgatgtttgcagaaatggaa
atcattggtcagtttaacttgggatttatcatcaccaaactgaacgcagatattttcata
gtggaccagcatgccacggatgagaaatacaacttcgagatgcttcagcagcacactgtc
ctccagggtcaaaggcttatagcacctcagactctcaacttaacagctgtcaatgaagca
gttctaatagaaaatctggaaatattcagaaagaatggctttgactttgttatcgatgaa
ggcgcgccggtcactcaaagagctaaattgatttccttgccaactagtaaaagctggacc
tttggaccccaggacatagatgaactgatcttcatgctgagcgacagccccggtgtcatg
tgccggccttcccgggtcaggcagatgtttgcctccagggcctgtcggaagtctgtgatg
attggaactgctcttaacacaagtgagatgaagaaactcatcacccacatgggggagatg
gaccatccctggaactgtccccacggaaggcccaccatgagacacattgccaatctggac
atcatttctcaaaactga
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