Delphinus delphis (saddleback dolphin): 132439586
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Entry
132439586 CDS
T11117
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddp03016
]
132439586 (TRUB1)
Enzymes [BR:
ddp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132439586 (TRUB1)
Transfer RNA biogenesis [BR:
ddp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132439586 (TRUB1)
Prokaryotic type
132439586 (TRUB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
132439586
NCBI-ProteinID:
XP_059889996
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All DBs
Position
16:complement(15303193..15355949)
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AA seq
348 aa
AA seq
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MAAAEAAVVSSSSLKPDTTPVPESAGMAAATAATSSAMAAAAAVAARTGSEARVSKPALA
TKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDS
AARGVLVVGIGRGTKLLTSMLSGSKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDI
EGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPF
FTLDVECGGGFYIRSLVSDIGRELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQ
SLEQCSSLLPAETALKKSKPEESNEPVLSCEYITLNEIKGEDDMIKTF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcgtcgtcatccttgaaaccagatacaacccca
gtccccgaaagtgcaggaatggctgcagccacggccgccacatcctcagcgatggctgca
gccgcggcggttgcggccaggaccggatccgaagccagggtctccaagcccgcgttggct
actaagctgctgtctctgagcggcgtgttcgccgtgcacaagcccaaagggcccacttca
gccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttctcca
gaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactctagacagt
gcagcccgaggagtcctggtggttggaattggaaggggaacaaaactgttgaccagtatg
ttgtcagggtccaagaggtatattgccactggtgaactggggaaagctactgacacgcta
gattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaggaagatatt
gaaggcattctacagaaatttactgggaatataatgcaagtacctcctctctattctgca
ttaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtagtagaagca
aaacctgccaggccagttaccgtgtacagtctttccctacaaaaattccagccaccattt
ttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacatt
ggcagagaactgtcttcctgtgccaatgtgctagagctgacccgcaccaaacagggaccc
tttacactggaggagcacgcccttcccgaagacaaatggacaattgatgacattgcacag
tctcttgagcagtgctcatcccttctcccagcagagacggcacttaaaaaatcaaaacct
gaggagtctaatgagccagttttgagctgtgagtacataactctaaatgagataaaggga
gaagatgatatgattaagacattttaa
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integrated database retrieval system
