Dickeya dianthicola: DDI_0220
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Entry
DDI_0220 CDS
T05141
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmi substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_0220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_0220
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DDI_0220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ATO31388
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All DBs
Position
212506..214053
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AA seq
515 aa
AA seq
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MARNLARHFLRKSVWKYALIALLAGVSCASHAGKQNDTLVYASDSEVENVSPYHNNMREG
VILAHLAWDTLIYRDPKSGEYKGELATDWQWESPMALLLHLRKGVTFHNGDAFSADDVVY
TFQSIAGPNTASVIPQSVDWIDKVEKVDDYTVRLHLKKPFPAALEYLAGPTPIYPANYFQ
RVKLEGFSKAPVGTGPYKIVKVTPGQGVSMVKNPDYFKDSPTGQPKIGKLQFVVIRDPEA
RMAQLLTGQVDWIWRVASDQVSSLSAMPNIAVKSGETMRVGFLQLNINAGGAEGAPIKDL
RVRQAINYAVNRQAMVDNLLRGGSKPVYSACFRTQTACDTSQVISYPYDPAKAKQLLAEA
GYADGFDTDLWAYRDRDYAEAIIGDLRKVGIRARLHFVQYPVMANALASGQAPMSFSTWG
SFSINDATAFVTPYFGGKGSDISKDPKLTAELAQADAVVDPQQRRALYATLLGHISAQAY
MAPLFSYSTHYAFTSDLNFQDWPDELPRFAEASWK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaatctggcaagacattttcttcggaaatctgtttggaaatatgcattaatc
gcattactggccggtgtttcctgcgccagccatgccggcaaacaaaacgacacgctggtt
tacgcctccgacagcgaggtggaaaacgtcagcccataccacaataacatgcgtgaaggg
gtgattctggcgcatctcgcctgggatacgctgatttatcgcgatccgaaaagcggagaa
tacaaaggcgagttggcgaccgactggcaatgggaatcgccgatggcattgttgctgcat
ctgcgtaaaggtgtgacctttcataatggcgatgcctttagcgccgatgatgtggtgtat
acctttcagagcatcgccgggccgaataccgcctcggttattccgcaaagcgtcgactgg
atcgataaagtggaaaaagtggacgactatacggtacgcctgcacctgaaaaaaccgttc
ccggcggcgttggaatatttagccggcccgacgccgatctaccccgccaactatttccaa
cgggtgaagctggagggctttagcaaagcgccggtcggcaccgggccgtacaaaatcgtc
aaggtcacgccggggcagggcgtgtcgatggtgaaaaatccggactatttcaaagacagc
ccgaccgggcaaccgaaaatcggcaaactgcagtttgtggtgatccgtgacccggaagcg
cgcatggcccagttgctgaccggccaggtggactggatttggcgggtggcgtcggatcag
gtgagttcgctgtccgccatgccgaatatcgcggtaaaaagcggcgaaaccatgcgcgtc
ggctttctgcaactgaatatcaacgccggcggtgcggaaggcgcgccgatcaaagatttg
cgcgtgcgtcaggccatcaactatgccgtcaaccgtcaggcgatggtggataatctgctg
cgcggcggcagtaagccggtctattccgcttgctttcgtacccagactgcctgcgatacc
agccaggtgatctcatatccctacgacccggccaaagccaaacaactgctggcggaagcg
ggctacgccgacggtttcgacaccgacttgtgggcctaccgcgaccgtgattacgccgag
gccataattggcgatctgcgcaaggtcggcatccgtgcccggctgcattttgtgcagtat
ccggtgatggcgaatgcgctggcgtccggtcaggcgccgatgtcgttcagcacctggggg
tctttctccatcaatgacgccaccgcgttcgttaccccttatttcggcggcaaaggcagc
gatatctcgaaagatcctaagctgaccgccgaactggcgcaggccgatgcggtggtagac
ccgcaacagcgccgtgcgctgtacgctacgctgttggggcacatttctgctcaggcttat
atggcaccgctgttctcctattccacccattatgcctttacttccgacctgaattttcag
gactggccggacgaactgccgcgcttcgccgaagcgagctggaagtaa
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