Dickeya dianthicola: DDI_0264
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Entry
DDI_0264 CDS
T05141
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_0264
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DDI_0264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
ABC_tran
SLFN-g3_helicase
Rad51
AAA_22
AAA_16
nSTAND_NTPase5
RecA_N
AAA_14
nSTAND3
NTPase_1
AAA_24
AAA
cobW
Zeta_toxin
AAA_29
AAA_5
Herpes_Helicase
Viral_helicase1
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
ATO31432
LinkDB
All DBs
Position
complement(249832..251217)
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AA seq
461 aa
AA seq
DB search
MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAAASSSSRSDRFSGYAGDSGN
VSRVQKLSEISLEALPRFSTGFQEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL
AEQMKTLYVTGEESLQQVAMRAHRLGLPAQHINMLSETSIEQICLIAEQEQPKLMVIDSI
QVMHLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDC
SVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGDEITSGSS
VMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVF
VNVVGGVKVTETSADLALLLSLVSSFRDRPLPQDLVVFGEVGLAGEIRPVPSGQERITEA
AKHGFKRAIVPFANMPKKPPANMQVMGVKKLSDALTILDDL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccgtcaaacgcgcctttgtctgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagcgcctgtcacgcctggaacaccatcaccgaggtacgcctggcc
gccgcgtcctcctcgtcacgcagcgaccgtttttccggttacgccggagacagcggcaac
gtcagccgggtgcagaaactgtcggaaatcagtctggaagcgctgccgcgtttctccacc
ggctttcaggaattcgaccgggtgctgggcggcggcgtggtgcccggcagcgccattctg
atcggcggcaaccccggtgcaggcaaaagcaccctattgctgcaaaccctgtgcaaactg
gccgaacagatgaaaaccctgtacgtcaccggcgaggaatccctccagcaggtggcgatg
cgcgctcaccgtcttggcctgcccgcccagcatatcaacatgctgtcggaaaccagcatc
gagcagatctgcctgattgccgagcaggaacagccgaaactgatggtgatcgactccatt
caggtgatgcatctggcggacattcaatcgtctcccggcagcgtggcgcaggtgcgggaa
accgccgcctacctgacacgcttcgccaaaacccgcggtgtggccatcgtcatggtcggc
cacgtcaccaaagacggctcactggccggcccgaaagtgctggagcactgtatcgactgt
tcagtgctgctggacggcgacgccgactcccgtttccgcaccctgcgcagccacaagaac
cgcttcggcgccgtcaatgagctgggcgtattcgccatgaccgagcaggggctgcgggaa
atcagcaacccgtccgccattttcctgagccggggcgatgaaatcacctccggcagttcg
gtgatggtggtgtgggaaggcacccggccgctgctggtggaaattcaggcgctggtggac
cactcgatgatggcgaatccgcgccgggtcgcggtcgggctggagcagaaccggctggct
attttgctggcggtgctgcaccgtcacggcgggctgcaaatgtcggatcaggacgtgttc
gtcaacgtggtgggcggcgtcaaggtaacggaaaccagcgccgacctggcgctgctgctg
tcgctggtgtcaagcttccgcgatcggccgctgccgcaggatttggtggtgttcggcgaa
gtcgggctggccggggaaatccgcccggtgccgagcggtcaggaacgcatcaccgaagcc
gccaagcacggttttaagcgcgccatcgtgccgtttgccaatatgccgaagaaaccgccc
gccaacatgcaggtgatgggcgtgaaaaaattgtcggacgcgctgacgatcctcgacgat
ctgtaa
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