Dickeya dianthicola: DDI_0455
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Entry
DDI_0455 CDS
T05141
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddq03016
]
DDI_0455
Enzymes [BR:
ddq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DDI_0455
Transfer RNA biogenesis [BR:
ddq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DDI_0455
Prokaryotic type
DDI_0455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATO31623
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All DBs
Position
427666..428622
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AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIQERLITFTRDLLMQALDDFRGDTK
QVPSMYSALKYQGRPLYEYARQGLVVPREARDITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLQALREQAEAQEQPIGELLDVL
LLPMDTAVQAFAEVNLSPVVAGYLKLGQAVRAAATPADGMVRITEGDERRFIGMGEIDDE
GRVAPRRLVVENPVPADA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgtcgccgcggccgggatatccacggcgttttgctgctggataaaccg
caaggagcatcgtccaacgatgtgctgcagaaggtaaaacgcctctttaatgccaacaaa
gccggacataccggcgcgctggatccgttagcgaccggcatgttgccagtttgtctgggt
gaagcgaccaaattttcccaatatctgttggatgcagataaacgctaccgggtgattgct
cgcctggggcagcgcactgatacctcggatgccgatggtaatgtgattcaggaacgcctg
ataacctttacccgtgacctgctgatgcaggcgctggacgatttccgcggcgataccaag
caggtgccgtcaatgtactccgcgctgaaatatcagggccgcccgctgtacgaatatgcg
cgtcaggggttggtcgtaccgcgtgaagcgcgtgatatcacggtgtatgagttacagttt
atccgttgggaaggggatgagctggaactggaaatccattgttccaagggaacttacatc
cgcaccattattgatgatctgggcgagaagctggggtgtggcgctcatgtgatttatctg
cgccggttgcaggtggcgacttatcctaccgagcggatggtgactctggaacagttgcag
gcgttgcgtgagcaggcggaagcgcaggaacagccgatcggcgaattgctggatgtgctg
ttgctgccgatggatactgccgtgcaggcgtttgcggaagttaatctgtcgccggtggtg
gcgggttatctcaagctaggacaggcggtgcgtgctgctgctacgccggccgacggtatg
gtgcgcatcaccgagggtgatgaacgccggtttatcggtatgggggaaattgatgacgaa
ggtcgggtcgcgccgcgtcgtctggtagtggaaaaccctgtgccggcggatgcctga
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