KEGG   Dickeya dianthicola: DDI_0479
Entry
DDI_0479          CDS       T05141                                 
Name
(GenBank) Type I restriction-modification system restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddq02048]
    DDI_0479
Enzymes [BR:ddq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DDI_0479
Prokaryotic defense system [BR:ddq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DDI_0479
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like LPD7
Other DBs
NCBI-ProteinID: ATO31647
LinkDB
Position
complement(452361..455465)
AA seq 1034 aa
MKFTEDTRVKIPTILHLMKLGYHYLSLKEQSWDKDTNIFPDIFTSAIARINPTILPDDIG
RLFKDIKLLLDNEDLGRAFFEKLTDRSNVKLIDFENFNNNSFHVVTELTCANGDEEFRPD
ITLLINGMPLVFIEVKKPNNREGILAERERISKRFQNPKFRRFANITQFMIFSNNMKYDD
SDPEPIQGAFYASSSYHEPVFNYFREEETFDLTALLKPLTDDAELMVLKDNNLEVIRTNP
EFQTNKDHNRPTNRICTSLLSRERLAFILRYALVYVAESDGLHKHIMRYPQLFATKAIAR
KLNAGINKGIIWHTQGSGKTALAYYNVRFLTDYFQKKQVIPKFYFIVDRLDLLQQAHREF
TARGLTVHQVNSRSAFARAIKATQVLHNHQGKAEITVVNIQKFKDDANVIATQDYDVNIQ
RVYFLDEVHRSYNPEGSFLANLSQSDTHAIKIGLTGTPLLGTDYNSRDLFGGYLHKYYYN
ASIADGYTLRLIREEIATNYRMVLQQALKDVEVRMGDVDRKQVYAHVSFVKPMLDYITTD
FANSRGAHNDDTIGGMVICDSSEQAKQMFALFNASHADDAPPPAMLEAENEITPAHAAEP
SAAYMATAREKRSIKRAALILHDVGTRQQRKDWVDEFKAGKIDLLFVYNMLLTGFDARRL
KKLYLGRVIRRHNLLQALTRVNRPYKHFRYGYVVDFADIRQEFDATNKAYFEELQSELGD
EMAHYSRLFKSQEEIRQEIDHIKDVLFHFDTDNAEIFTDQINQIQDRQTMLALKNALANA
KSLYNLIRLQGNIEFLQALDFSKLNLLYREASHHLDLLNLQADLEQGADTSNLLNRALEE
VIFKFVKIGEEELVLADKLKDTLRRTREALASNFDPQDPQFITLKEELERLFKKKKLSDV
TQDEMVANISTLNKIHDRIKELNRQNTLLRQKYRGDAKYARTHKRLQERGGLSAPERKIF
EALSDIKRDADEKVLNNSQILNNESYFEQQMVSCVIEHFEDRHHITLTAQAATEINRLIV
TEYLNEFNTGARTW
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgaaattcactgaagatacccgcgttaaaatcccaaccatccttcatttaatgaaattg
ggttaccactacctgtcgcttaaagagcaaagctgggataaagacaccaacatctttcct
gatatttttacttccgctatcgccagaattaaccccaccattctccctgacgatattggt
cgcctgtttaaagacatcaagctcctgctggataacgaagatttaggccgtgcatttttt
gaaaagctgaccgaccgttccaacgtaaaactgatcgacttcgaaaattttaacaacaac
agttttcatgtcgtcaccgagctcacctgtgccaatggcgatgaagaattccgccccgac
atcacgttattgatcaatggaatgccgttggttttcattgaagtgaagaagcccaataac
cgggaaggtattctggcggaacgggaacgtatcagtaaacgctttcagaaccctaaattc
agacgcttcgccaacatcacccagttcatgatcttctccaataacatgaagtacgatgac
agcgatcccgaaccgattcagggggctttctatgccagcagctcgtaccatgaaccggta
tttaattacttccgtgaagaagaaacctttgatctgacggcgttgctaaaaccgctgacg
gatgacgcggaactcatggtgctgaaagacaataacctggaagtgattcgcaccaaccct
gaatttcagactaataaagatcataaccggccgacgaaccgtatctgtacctcactgctg
agccgggagcggctggcgtttatcttgcgctatgcgttggtgtatgtcgccgagtcagac
ggcctgcacaagcacatcatgcgttatccgcagttgttcgccaccaaagcgattgcgcga
aaactgaatgccggtatcaacaaaggcattatctggcatacgcagggcagcgggaaaacc
gcgctggcgtactataacgtgcgcttcctgacggattactttcagaaaaagcaggtgatc
ccgaagttttattttattgtcgacaggctggatttactccagcaggcacaccgcgaattc
accgcccgtgggttaaccgtgcatcaggtcaactcgcgtagcgctttcgcccgcgccatt
aaagccacccaggtgctccacaatcatcaggggaaagcggagattaccgtcgtcaacatc
caaaaatttaaagacgacgcgaatgtcatcgccacacaggattacgatgtgaatattcag
cgggtgtactttctggatgaagttcaccgtagctataacccggaaggtagctttcttgcc
aacttaagccagtcggacacccatgccatcaaaattggcctgacgggaacaccgttactg
ggaaccgactacaactcccgcgacctgtttggcggttacctccacaaatactattacaac
gcctccatcgcagacggttataccttgcgcctgatccgggaagagatcgccaccaattac
cgcatggtgctacaacaggcgttgaaagacgttgaagtcagaatgggggatgtggaccgc
aagcaggtgtatgcccacgtaagtttcgttaaaccgatgctggactacatcaccaccgat
tttgccaacagccggggcgcgcacaatgatgacaccatcggtggcatggtgatctgcgat
agttcggaacaggcgaaacaaatgtttgccttgtttaacgccagtcacgcagacgatgca
ccaccacccgcgatgctggaggcagaaaacgagataacgccagcacacgccgctgaaccg
agcgccgcctatatggccaccgccagggaaaaacgcagcatcaaacgtgccgccctgatc
ctgcatgatgtgggaaccaggcagcaacgcaaagactgggtggatgagttcaaggctggg
aaaatcgatttactttttgtttacaatatgttgctaaccggttttgatgccagacgcctg
aaaaagctctatctgggccgagtcattcgcaggcacaacctgctccaggcgctgacccgc
gtcaaccgcccctacaaacatttccgctacggctacgtggtggattttgccgatattcgc
caggaattcgatgccaccaataaagcctatttcgaggagcttcagtccgaactgggcgac
gaaatggcgcactattcccggctgttcaaatctcaggaagagatccgtcaggaaatcgac
cacatcaaagatgtgctgttccattttgataccgacaatgcggaaatctttaccgaccaa
atcaaccagattcaggaccggcaaacgatgctggcgctgaaaaacgccttagccaatgcc
aaaagcctgtataacctgattcgcctgcaaggcaatatcgaatttcttcaggcactggat
ttcagcaaacttaacctgttgtaccgtgaagccagtcaccaccttgacctgctgaatctg
caagcggacctggaacaaggtgctgatacctcaaacctgctgaaccgggcgctggaagaa
gtcatcttcaaattcgttaaaatcggcgaagaagaactggtgctggccgacaagctgaaa
gacacgctgcgccgcacccgcgaagcgctggccagcaattttgacccgcaagacccgcag
ttcatcaccctgaaagaagagctggagcgcctgtttaagaaaaagaaactcagcgacgtc
acccaggatgaaatggttgcgaatattagcacactcaataaaattcatgaccgcatcaaa
gagctgaaccgccagaacaccctgctgcgccagaagtaccggggcgatgccaagtatgca
cgcacccacaagcggttgcaggaacgcggcggacttagcgcgccggagcgcaaaatcttt
gaagccctgtctgacatcaagcgcgatgcggatgaaaaagtactgaacaacagccagatc
ctgaacaatgagagttactttgaacagcagatggtgtcatgcgtgatcgaacactttgaa
gaccgacaccatattaccctgacggcacaggcagcgacggagattaaccgcctgattgtc
acagagtacctgaacgaatttaataccggagcacgcacgtggtag

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