Dickeya dianthicola: DDI_0895
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Entry
DDI_0895 CDS
T05141
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddq03032
]
DDI_0895
03036 Chromosome and associated proteins [BR:
ddq03036
]
DDI_0895
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_0895
DNA replication proteins [BR:
ddq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DDI_0895
Chromosome and associated proteins [BR:
ddq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DDI_0895
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DDI_0895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ATO32063
LinkDB
All DBs
Position
880008..880280
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAIIGSVTESLKAGDDVALVGFGTFSVRERAARTG
RNPQTGKEISIPAAKVPGFRAGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcacaattgatcgacaagattgccgcagatgctgatatttccaaagcggca
gcagggcgtgtgttggatgcaattattgggtctgttactgaatctctgaaagcaggagat
gacgttgctttagtcggttttggcacgttctccgtgcgtgagcgcgcagcgcgcaccggt
cgtaatccgcaaaccgggaaagaaatcagtattccggccgccaaagtaccgggtttccgt
gccggcaaggcactgaaagactcagtgaattga
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integrated database retrieval system
