Dickeya dianthicola: DDI_0921
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Entry
DDI_0921 CDS
T05141
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq03030
DNA replication
ddq03430
Mismatch repair
ddq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDI_0921
03430 Mismatch repair
DDI_0921
03440 Homologous recombination
DDI_0921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddq03032
]
DDI_0921
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_0921
Enzymes [BR:
ddq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDI_0921
DNA replication proteins [BR:
ddq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDI_0921
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDI_0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
AAA_16
ResIII
AAA_2
AAA_assoc_2
TsaE
AAA_7
nSTAND3
AAA_24
Mg_chelatase
PIF1
Adeno_E1B_55K_N
RCF1-5-like_lid
SKI
Motif
Other DBs
NCBI-ProteinID:
ATO32089
LinkDB
All DBs
Position
906611..908623
Genome browser
AA seq
670 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDTCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDA
EQIRRHLQQVLEQEQLAAEPRALQLLARAADGSLRDALSLTDQAIAMGQGQVTAAAVSQM
LGTLDDEQPLALIEALVKGDGAGVMALMGQAAARGVDWEALLVETLTLLHRIAMLQLLPS
ALGDEYNQVAPRLRELARVIPPAEVQLYYQTLLVGRKELPYAPERRMGVEMTLLRALAFH
PSQTIAEPVPVSAPSAVPAAGAPLPADPSRVPPSVRPSAMPVVSGDEALSRHVPATGSEP
PAAPAPDSNLPDATAQLLQARSQLLNRQGNTPTKKAEPAASGKARPVNSALERLASVTER
GQQQMAAKAVAQEEQKKQEAYRWRAQKKAEQVETAPVTTPKALRSALEYEKTPELAAQLA
EEAIERDAWAAEIDRLTLPKLVQQLALNAFKEMPEEGVIHLHLRTSQRHLNSAAAQKMLS
EALAAHYGRPISLTVTEDDTPAVRTPLEWRQAIYEEKLAQARQSIMADNNIQTLRRFFDA
ELDEESIRPV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgtccccaaacctttgctgacgtggtaggt
caggaacatgtcctgacggcgttagccaatggtctttcgttaggccgtatccatcatgct
tacctgttttccggcactcggggcgtaggcaagacgactatcgcccgtttactggcgaaa
gggctgaattgcgaaaccgggatcacggccacgccctgcggccagtgcgatacctgccgg
gaaatcgaacaggggcgatttgtcgatctgatcgagatcgacgcagcgtcccgcaccaaa
gtggaagatacccgcgatctgctggataacgtgcaatacgctccggcccgcggccgcttc
aaggtttacctgatcgacgaagtacacatgctctcccgccacagcttcaacgcgttgctg
aaaacgctggaagagccgccgccgcatgtgaaattcctgctggcgaccaccgatccgcaa
aagctgccggtgactattctgtcccgctgtttgcagtttcatctcaaagcgcttgatgcc
gagcagattcgccggcatttgcagcaggtgctggagcaggaacaactggctgcggaaccg
cgcgcgctgcaattgctggcccgtgccgccgatggcagcctgcgcgacgcgctgagcctg
actgatcaggcgatcgctatggggcaagggcaggtcaccgccgccgccgtcagccagatg
ctgggcacgttggatgatgaacagccactggcgttgattgaagcgctggtgaaaggcgat
ggcgccggggtcatggcgctgatggggcaggcggcggcgcgcggcgttgactgggaagcg
ttgctggtggaaaccctgacgttgctgcaccgcattgccatgctgcagttgctgccttcc
gcattgggtgacgaatacaatcaggtagcgccccggctgcgtgaactggcgcgtgtgatc
ccgcctgccgaagtacagctttattatcagacgctgttggtcggtcgtaaggagttgccg
tacgcgccggagcgccgcatgggcgtggaaatgaccctgctgcgtgcgctggcgtttcat
cccagccagacgattgccgaaccggttccagtcagcgcgccatccgcggtgcctgcggcg
ggtgcgccgttaccggccgacccctcgcgcgtgccgccatcggtcagacctagcgcgatg
cccgtcgtatccggcgatgaagcactgtccaggcatgttccggcaacgggcagcgaaccg
ccggcggcgccagccccggacagcaatttgccggatgcgaccgcgcagttgctacaggcg
cgcagtcagttgctgaaccggcagggaaataccccaacaaaaaaggctgaaccggctgcg
tcaggaaaagcgcggccggtaaactcggcgttggagcggctggcttcggtgaccgagcgt
ggtcagcagcaaatggcggccaaagccgtagcgcaggaagagcagaaaaagcaggaggct
tatcgctggcgggcgcagaagaaagccgagcaggttgagacggcgccggtgactacgccc
aaggcgctacgctcggcgctggaatatgaaaagacgccggaactggcggcgcagctggcg
gaggaagccatcgagcgcgatgcctgggcggcggaaatcgatcgtctaacgttgccgaag
ctggtacaacagctggcgcttaatgcgtttaaagagatgccggaggagggggtgattcac
ctgcacctgcgtacttctcagcgccatctgaattcggcggcggcgcagaaaatgctgtcg
gaggcgctggcggcgcactacggacgcccgatcagcctgacggtcaccgaagacgatacc
ccggcggtccgtacgccgctggagtggcgacaggccatttatgaagagaagctggcgcag
gcgcgccagtccatcatggctgataataatattcaaacgctacggcgtttctttgatgcg
gaactggacgaagagagtatccgccccgtttaa
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