Dickeya dianthicola: DDI_1061
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Entry
DDI_1061 CDS
T05141
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] beta chain
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00020
Citrate cycle (TCA cycle)
ddq00640
Propanoate metabolism
ddq00660
C5-Branched dibasic acid metabolism
ddq00720
Other carbon fixation pathways
ddq01100
Metabolic pathways
ddq01110
Biosynthesis of secondary metabolites
ddq01120
Microbial metabolism in diverse environments
ddq01200
Carbon metabolism
Module
ddq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ddq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DDI_1061
00640 Propanoate metabolism
DDI_1061
00660 C5-Branched dibasic acid metabolism
DDI_1061
09102 Energy metabolism
00720 Other carbon fixation pathways
DDI_1061
Enzymes [BR:
ddq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DDI_1061
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Ligase_CoA_2
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ATO32229
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Position
1060434..1061600
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AA seq
388 aa
AA seq
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MNLHEYQAKQLFARYGLPAPTGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGV
KLVNSKEEIRAFAENWLGKRLVTYQTDANGQPVHQILVEGATDIDKELYLGAVVDRGTRR
VVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPQPYQGRELAFKLGLNGKQVAQFTKI
FMGLAALFLDRDLALVEINPLVITKQGDLICLDGKLGADGNALFRQPELREMRDHSQEDA
REAHAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGSPANFLDVGGGATKERVTE
AFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAQK
LADSGLNIIAATSLTDAAQQVVAAVEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacatgagtatcaggcaaaacagctctttgcgcggtatggtttaccggcgcct
accggttacgcctgtacaacaccgcgtgaagcggaagaagcggcatccaagattggcgca
ggtccgtgggtcgtgaagtgtcaggttcatgccggtggccgcggcaaggccggcggcgtg
aagctggtgaacagcaaagaagagattcgtgcttttgccgaaaactggttgggtaagcgt
ctggtgacctaccagactgacgccaacggccagccggttcaccaaattctggtggaaggt
gcgacggacattgataaagaactttatctgggtgcggttgtcgaccgcggcactcgtcgt
gtggtgttcatggcgtccaccgaaggtggggtagagattgagaaagttgcagaagaaacg
ccgcatctgatccataaagtggcgttggatccgttgaccggtcctcagccttatcagggg
cgcgaactggcgttcaaactgggcctcaacggcaagcaggtagcgcagttcaccaaaatt
ttcatgggactggcggccctgttcctggatcgcgatttggcgctggtggaaatcaacccg
ctggtgataaccaaacaaggtgatttgatctgcctggacggcaagctgggcgccgacggc
aatgctctgttccgtcagccggaactgcgcgaaatgcgcgaccactctcaggaagatgcg
cgtgaagcgcatgccgcgcagtgggaactaaactatgtggcgctggatggcaatatcggt
tgcatggtaaacggcgccggtctggctatggggacgatggacatcgtgaaactgcacggc
ggttcaccggccaacttccttgatgtgggcggcggtgcaaccaaagagcgtgttaccgaa
gccttcaagatcattctgtccgacgacaaggtgaaagcggtactggtgaatattttcggc
ggtatcgtgcgttgtgacctgattgccgacggtattatcggcgcggtagccgaagtgggt
gtgaatgttccggtagtggtgcgtctggaaggtaataatgccgaattgggggcgcaaaaa
ctggcggatagtggtttgaacatcattgctgcgaccagcctgacggatgcggctcagcaa
gtggttgctgcagtggagggtaaataa
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