Dickeya dianthicola: DDI_1143
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Entry
DDI_1143 CDS
T05141
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_1143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_1143
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DDI_1143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
AAA
TniB
CbiA
AAA_18
MobB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ATO32311
LinkDB
All DBs
Position
1142929..1143948
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AA seq
339 aa
AA seq
DB search
MTLLNVNGLVNVNGLLNVNGLTLENRQGIRLVDAVSFSLRKGEMLGLVGESGSGKTLTCR
ALMRLLPGAGLRIAAGEVWLNGQDVMQLNDAQMTNVRGRQLGMIFQNPASHLNPVMTIGE
QIAESRRLHFGSRRRAARDEAIALLQQVGIPDPVRRAGHYPHEFSGGMRQRAMIAVALAC
EPQILIADEPTTALDVTVQMQILRLLAQLRQQLGIAIIMITHDLGVVAQTCDRMAVMYGG
RLCELGDKRALLSSPHHPYTRALIACQPMQAGDSGPLRTLPGQPPLPEQFGDGCRFEPRC
ARAGERCRRQTPRLTGSCADTARQLACHYPLVEQEGEAG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgctattgaatgtaaacggattggtgaatgtaaacggactgctgaatgtaaacgga
ctgacgctggagaaccgccaggggatccggctggtggacgcggtttccttttccctgcgg
aaaggcgaaatgctggggctggtgggtgagtccggctccggcaagaccctgacctgccgg
gcattgatgcggttgctgccgggggctgggctgcgcatcgccgccggcgaggtgtggctc
aacggccaggatgtgatgcaattgaacgacgcgcagatgaccaacgtacgcgggcgacag
ttggggatgatttttcaaaaccccgccagccaccttaatccggtgatgaccattggcgag
cagatcgccgaaagccgccgcctgcatttcggcagtcgccgccgcgcggcacgcgatgaa
gcgattgcgctgttgcaacaggtcggcatccccgacccggtaagacgggccggccattat
ccgcacgagttttccggcggcatgcgtcagcgggcgatgatcgccgtggcgctggcttgc
gaaccgcagattctgatcgccgacgaaccgaccaccgcgctggacgtcacggtgcagatg
cagatcctgcggctgctggcgcagctgcgccagcaactgggcatcgccatcatcatgatc
acccacgatttgggggtagtggcgcagacctgcgaccgcatggcggtgatgtacggtggc
cgtctgtgcgagctgggcgataagcgggcgctgctgtcttcgccgcatcatccctatact
cgcgcgctgattgcgtgccagccgatgcaggccggcgacagcggaccgttgcgcacgtta
cccggtcagccgccgctgccggaacagttcggcgacggatgccggtttgagccgcgctgc
gcgcgggcgggcgaacgctgccggcggcagacgccgcgtctgaccgggtcgtgtgccgat
acggcgcgacagctggcgtgtcattacccgctggtggaacaggaaggagaggccggatga
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