Dickeya dianthicola: DDI_1824
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Entry
DDI_1824 CDS
T05141
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ddq
Dickeya dianthicola
Pathway
ddq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDI_1824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_1824
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DDI_1824
RecFOR pathway proteins
DDI_1824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
HHH_8
Transposase_20
HHH_3
HTH_78
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
ATO32992
LinkDB
All DBs
Position
1851909..1852523
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AA seq
204 aa
AA seq
DB search
MIGRLRGIVLEKQPPLVLIEASGVGYEVHMPMTCFYELPDLGQEAVIFTHFVVREDAQLL
FGFNNKQERSLFRELIKVNGVGPKLALAILSGMSAQQFVNAVERQEINTLVKLPGVGKKT
AERLVVEMKDRFKGLNGDLFNAASDISLPAAANAEPEADPQAEAEAALVALGYKPQEAGR
MVSNVARPGADCETLIREALRAAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgataggtcgtctcagaggcatcgtactggaaaaacagccgccactggtcttgattgaa
gccagcggcgtcggctatgaagttcatatgccgatgacctgcttttacgagttgccggat
ctcggccaggaagcggtgatttttacccattttgtggtgcgtgaagacgcgcaattactg
tttggtttcaacaataaacaagagcgttctctgttccgcgagctgatcaaagtgaatggt
gtggggccgaaactggcgctggcgattttgtccggcatgtcggcccagcagttcgtcaac
gcggtggaacgtcaggaaatcaacacgctggtgaaattgccgggcgtgggcaagaaaacg
gcagaacgtctggtcgtggaaatgaaagaccgttttaaagggttgaatggcgatctgttc
aacgctgccagcgatatttccttgccggcggcggctaatgcggaaccggaggcggatccg
caggcggaagccgaagcggcgctggtcgccctcggttataaaccgcaggaggccggccgg
atggtgagcaacgtggcgcggccgggcgccgactgcgaaaccctgatcagggaagcgctg
cgcgctgcgctgtga
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