KEGG   Dickeya dianthicola: DDI_1887
Entry
DDI_1887          CDS       T05141                                 
Name
(GenBank) DNA-binding protein H-NS
  KO
K03746  DNA-binding protein H-NS
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ddq03036]
    DDI_1887
   03400 DNA repair and recombination proteins [BR:ddq03400]
    DDI_1887
Chromosome and associated proteins [BR:ddq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    DDI_1887
DNA repair and recombination proteins [BR:ddq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DDI_1887
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS DUF6626 DUF3037 CR6_interact PaaX_C TetR_C_24
Other DBs
NCBI-ProteinID: ATO33055
LinkDB
Position
complement(1910963..1911508)
AA seq 181 aa
MVGQHVISVLNLLNFNNLTILPIAENKTALYYLCTVTDNIYFEIKPMSEALKILNNIRTL
RAQARECSLETLEEMLEKLEVVVNERREEDNQAQAEIEERTRKLQQYREMLIADGIDPNE
LLQSLGSSKVAGKAKRAARPAKYQYTDENGELKTWTGQGRTPAVIKKAVEEQGKSLDDFL
L
NT seq 546 nt   +upstreamnt  +downstreamnt
ttggtcggtcaacacgtgatttccgttttaaatttgctaaattttaacaacctgacaatt
ttgcctattgcagaaaataaaacagcactctattatctctgtactgtcaccgataatatt
tattttgagattaaaccaatgagcgaagcacttaagattctaaacaacatccgtactctg
cgcgcccaggcaagagaatgcagcctcgaaacgctggaagaaatgctggaaaagctggaa
gtcgtggtgaacgagcgccgcgaagaagacaaccaggctcaggcagaaattgaagaacgc
acacgcaaattacagcaatatcgtgaaatgcttattgccgatggcattgacccgaacgaa
ttactgcaatcgctgggttcaagcaaagttgccggcaaagccaagcgtgcagcacgtccg
gctaaatatcagtacaccgacgaaaacggcgagctgaaaacctggaccggtcagggtcgt
accccggcagtcatcaagaaagcagttgaagaacaaggcaagtctctggatgacttcctg
ctgtaa

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