Dickeya dianthicola: DDI_1887
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Entry
DDI_1887 CDS
T05141
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddq03036
]
DDI_1887
03400 DNA repair and recombination proteins [BR:
ddq03400
]
DDI_1887
Chromosome and associated proteins [BR:
ddq03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
DDI_1887
DNA repair and recombination proteins [BR:
ddq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DDI_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6626
DUF3037
CR6_interact
PaaX_C
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
ATO33055
LinkDB
All DBs
Position
complement(1910963..1911508)
Genome browser
AA seq
181 aa
AA seq
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MVGQHVISVLNLLNFNNLTILPIAENKTALYYLCTVTDNIYFEIKPMSEALKILNNIRTL
RAQARECSLETLEEMLEKLEVVVNERREEDNQAQAEIEERTRKLQQYREMLIADGIDPNE
LLQSLGSSKVAGKAKRAARPAKYQYTDENGELKTWTGQGRTPAVIKKAVEEQGKSLDDFL
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttggtcggtcaacacgtgatttccgttttaaatttgctaaattttaacaacctgacaatt
ttgcctattgcagaaaataaaacagcactctattatctctgtactgtcaccgataatatt
tattttgagattaaaccaatgagcgaagcacttaagattctaaacaacatccgtactctg
cgcgcccaggcaagagaatgcagcctcgaaacgctggaagaaatgctggaaaagctggaa
gtcgtggtgaacgagcgccgcgaagaagacaaccaggctcaggcagaaattgaagaacgc
acacgcaaattacagcaatatcgtgaaatgcttattgccgatggcattgacccgaacgaa
ttactgcaatcgctgggttcaagcaaagttgccggcaaagccaagcgtgcagcacgtccg
gctaaatatcagtacaccgacgaaaacggcgagctgaaaacctggaccggtcagggtcgt
accccggcagtcatcaagaaagcagttgaagaacaaggcaagtctctggatgacttcctg
ctgtaa
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