Dickeya dianthicola: DDI_1945
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Entry
DDI_1945 CDS
T05141
Name
(GenBank) L-arabinose-binding periplasmic protein precursor AraF
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DDI_1945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_1945
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
DDI_1945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
DUF1651
DUF5421
PucR
Motif
Other DBs
NCBI-ProteinID:
ATO33113
LinkDB
All DBs
Position
1965158..1966141
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AA seq
327 aa
AA seq
DB search
MHKFTKVLAAIGLAAVMSQSAIAENMKLGFLVKQPEEPWFQTEWRFADKAGKDLGFDVIK
IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGAAIVAKARSYNLKVIAVDDQFVNAKG
QPVDSVPLVMMAATKIGERQGLELWKEMQKRGWKLQETAVMAITANELDTARRRTSGSME
ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPNVKNWLVIGMNDNTVLGGVRATE
GQGFKAASVIGIGINGVDAVSELSKSQPTGFYGSLLPSPDVHGYKSIQMLHDWVTKGVEP
QKFTEVTDVVLITRDNFKTELQKKGLM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcataaattcactaaggttctggcagcgattggcctggccgcggttatgtcacaatca
gctatcgcggaaaatatgaaactgggctttctggtcaaacagccggaagagccctggttc
cagaccgaatggcggttcgctgacaaggccggtaaagacctgggatttgacgttatcaag
atagccgtaccggatggcgaaaaaaccctcaatgctatcgacagcctggcggccagcggc
gccaaagggtttgtcatctgtactcctgacccgaagctgggggcggctattgtagccaag
gcgcgcagctataacctgaaagtgatcgcggtggatgaccagttcgtcaacgccaaaggg
cagccggtggacagcgtgccgctggtgatgatggcggccaccaagattggcgagcgtcag
ggcctggagctgtggaaagagatgcagaaacgcggctggaaactgcaggaaacggcggtg
atggcgatcaccgccaatgagctggataccgcccgtcgccgtacctccggttcgatggag
gcactgaaagccgccggattcccggaaaaacagatctatcaggtgccgaccaaatccaac
gatattcccggggcgtttgacgccgccaactcgatgctggtgcagcatccgaacgtgaaa
aactggctggtgatcggcatgaacgacaacactgtgctgggcggcgtgcgtgcaactgaa
ggacagggattcaaggcggctagcgtgataggcatcggtatcaacggggtggatgcggtc
agcgaactgtccaaatcgcagccgaccggcttctacggctcgttgctgcccagcccggac
gtgcatggctacaagagtattcagatgttgcatgactgggtgaccaagggcgtcgaaccg
cagaaattcaccgaagtgacggatgtggtgctgatcacccgcgataacttcaaaactgaa
ttgcagaagaaaggcctgatgtaa
DBGET
integrated database retrieval system
