Dickeya dianthicola: DDI_1997
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Entry
DDI_1997 CDS
T05141
Name
(GenBank) putative ABC transporter, periplasmic substrat X binding protein precursor
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_1997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_1997
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DDI_1997
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
Lipoprotein_10
DUF6200
Motif
Other DBs
NCBI-ProteinID:
ATO33165
LinkDB
All DBs
Position
complement(2021723..2022856)
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AA seq
377 aa
AA seq
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MFTRLSLSKIGRLAALPMLLLALPQVQAQTPDLSTMSWQAVEAQARQEGQLTWFNWYYQD
RLREEVKVFEKQYGIRVTIPDGEAAASINKLLAEQHREQGDIDVISVGGSQFGQLNGPKL
FWGPLSARLPAGDTLSYQIEGGDTRGYAVAFWGNQTVIAYNSARITAAELPHSLPQFEQF
LVKNPGEFAFNVENGGAGPGFVESVTRALVTDVNYRDGKAAPEILQRLAPSWRWFNRYKN
SLVISASNADSITRLNAGEFKLVASWEDLVLSLQHKGEVSPDIKFYLPEFGMPGGGNVVG
IPANAKHKAAALLFIHWLTQPDTQQRFHSQFGTALLTPAGDGTQAADSLDRSRSFAWAAK
PLGDEIKKQFIQNVMLK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttcactcgactcagtctgtcaaaaatagggcggctggcggcgttgccgatgttgctg
ctggcgttaccgcaggtgcaggcccagacgccggacttgtccacgatgtcctggcaggcg
gtggaagcacaggcgcgtcaggaaggtcagcttacctggtttaactggtattaccaggat
cggctgcgcgaagaggtgaaagtgtttgagaaacagtatggcattcgggtcaccattccg
gatggcgaggcggcagccagcatcaacaaactgctggcggagcagcaccgcgagcaaggc
gacattgacgttatctcggtgggcggcagccagttcgggcagcttaacggccccaaactg
ttctgggggccgctctctgcgcggctgccggccggcgacacgctgagctatcagatagaa
gggggcgatacccggggttatgcggtggcgttctggggcaatcagaccgtgatcgcctac
aattcggcccgcatcaccgcggccgagctgccgcattcgttgccccagttcgaacagttt
ctggtgaaaaaccccggtgaattcgcctttaacgtggaaaatggcggcgccggccctggg
tttgtcgaatccgtcacccgggcgttggttaccgacgtgaactaccgcgacggcaaggcc
gcgccggagatactgcaacggctcgcaccgtcctggcgctggttcaaccgttacaaaaac
agcctggtgatcagtgcgtccaatgccgacagcattacccggctgaatgccggcgaattt
aaactcgtcgcttcatgggaggatttggtgctttcgttgcagcacaaaggcgaagtgtcg
ccggacatcaagttctacctgcctgagtttggcatgccgggcggcggcaatgtggtgggg
atcccggccaacgccaaacataaggcggcggcgttgctgttcatccactggctgacgcag
ccggacacgcaacagcgttttcactcgcagttcggcacggcgttgttgacgccggcaggc
gacggcactcaagcggcggattcgctggaccggtcgcgcagtttcgcctgggcggccaag
ccgttgggcgacgaaatcaaaaagcagtttattcaaaacgtgatgctgaaatga
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