Dickeya dianthicola: DDI_1998
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Entry
DDI_1998 CDS
T05141
Name
(GenBank) Putative ABC transporter of substrate X permease subunit II
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_1998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_1998
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DDI_1998
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF7428
Motif
Other DBs
NCBI-ProteinID:
ATO33166
LinkDB
All DBs
Position
complement(2022892..2023725)
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AA seq
277 aa
AA seq
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MQQTVIDRLNRLLVVVLLLLGTVWLILPFAMAVLWSLVDPSHPWAYPDVFPPVLSLLRWR
ELWNNTSLPDALLHSYLLAPMVTQTCLLLAMPTAYAFGRLSFPGKGLAQTLTLLPIVLPG
FVVAVFFSSLLTRLGFYSRFMGIFLGHTVLFLPYAIRILSVSFSQVRQDLVDAARNLGAS
RREVFRVAYWPALQSGVMAAMIMVFILSIEEFSVSYIVGAPDFITVPTILYSYLGYNFIR
PNAAVVSLILVVPNVLLMLLMERCLKHVPASAFVNKG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaccgtgattgaccgactcaaccgcctgctggtggtggtgctcctgctgctg
gggaccgtgtggttgattctgccgtttgctatggcggtgctatggtcattggtggacccg
tctcacccgtgggcgtacccggatgtcttcccgccggtcttgtcgctgctgcgctggcgt
gaattatggaacaacacttcgctgcccgatgcgctgttgcacagctatctgctggcgccg
atggtgacgcagacctgcctgctgctggcgatgccgaccgcctatgcgtttggccgcctg
tcgtttcccggcaaagggttggcgcagacgctgacgcttttgccgattgtgttgccgggg
ttcgtggtggcggtgttcttctcctcgttgctgacgcggctggggttctattcgcggttc
atggggatcttcctcggtcacacggtgctgtttctgccgtacgccatccgcattctgagc
gtctctttcagtcaggtccggcaggatctggtggatgcggcgcgcaacctgggggcctcc
agacgggaagtcttccgggtggcttactggccggcgcttcagtccggagtgatggcggcg
atgatcatggtgttcattttgtccatcgaagagttttccgtttcctacattgtcggcgcg
ccggactttatcaccgtgccgaccattctgtattcgtacctgggttataacttcattcgc
cccaacgcggcggtggtgtcgctgattctggtggtgcccaacgtgctgttgatgctgctg
atggagcgctgtctcaaacatgttccggcgtctgcgttcgtcaataagggataa
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