KEGG   Dickeya dianthicola: DDI_2174
Entry
DDI_2174          CDS       T05141                                 
Name
(GenBank) Type III secretion outermembrane pore formin protein (YscC,MxiD,HrcC, InvG)
  KO
K03219  type III secretion protein C
Organism
ddq  Dickeya dianthicola
Pathway
ddq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DDI_2174
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddq02044]
    DDI_2174
Secretion system [BR:ddq02044]
 Type III secretion system
  Type III secretion core apparatus
   DDI_2174
SSDB
Motif
Pfam: Secretin Secretin_N TraK_C
Other DBs
NCBI-ProteinID: ATO33342
LinkDB
Position
complement(2202472..2204547)
AA seq 691 aa
MRNALYALLFNLYRLFCWSLVLMGILPIAHAATPPDWSKGAYAYSAEQTPLSAVLQDFAG
SHGVDLVLGNVQDVNIEAKIRADNAVAFLDRLALEHRFQWFVYNNVLYASPQDEQASVRI
EVSQDAAPDMKQALTGIGLLDSRFGWGELPEEGVVLVTGPAEYVNLIRNFSQQRETKEDR
RKVMIFPLRYASVSDRTIQYRDQRLVIPGVATILNELMDGNRSASAGASAAASGMGNDGA
MGAAAGAAGGQDANQSIELNARAMLARLASRSSGGAAAAARKKDQLNGKVSADVRNNALL
IRDDEKRRDEYQQLIDKIDVPQNLVNIDAIILDVDRTALSRLEANWQGKLGAVTGGANMM
SGSSTLFVSDFKRFFADIQALEGEGTASIVANPSVLTLENQPAVIDFSRTAFITATGERV
ANVQPVTAGTSLQVTPRVVGRGSLNSIQLVIDIEDGQVETNTEGTASGVKRGTVSTQALI
GENRALVLGGFHVEESGDRDKRIPLLGDIPWIGKLFTSRQHEVSRRERLFILTPHLIGDQ
NDPTRFVSADNRRQLNDAMGRVAQRNSKTDLFGMVESAMRDLASGQTPAGFTIDGSGARL
SELCRTSPSLSYQSNRHQWYSNLTLSLAVGVVKNTGTRPQRFDEANCASSRTLAVAAWPK
TTLAPGESTEVYLALLPAKNAQPSRASLIKP
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgcgtaacgcgctgtatgcactgttattcaacctctatcgtctgttttgctggtcgctg
gtgttgatggggatactgcccatcgcgcacgcggcgacgccgcccgactggagcaaaggc
gcgtatgcctattccgccgagcaaacgccgctgtcggcggtattgcaggatttcgccggc
agccacggcgtcgatctggtgttgggcaacgttcaggacgtcaacatcgaagccaaaatc
cgtgccgacaacgccgtggcgtttctggataggctggcgctggagcaccgttttcagtgg
ttcgtctacaacaacgtgctgtacgccagcccgcaggatgagcaggcgtcggtgcgcatt
gaggtgtcgcaggatgcggcgccggacatgaagcaggcgctgaccggcattggcttgctg
gattcgcgttttggctggggggaactgccggaagagggggtggtgttggtcaccggcccg
gcggaatacgtcaacctgatccgcaatttcagccagcaacgcgaaaccaaggaagatcgc
cgcaaggtgatgatttttccgctgcgttatgcctcggtgtcggaccgcactattcaatat
cgcgatcaacgtctggtgatccccggcgtggcgaccattctgaatgaactgatggatggc
aaccgcagcgcgtccgccggtgcgtcggccgccgccagcggcatgggtaacgacggcgcg
atgggcgctgccgccggtgccgccggtgggcaggatgccaaccagtcgattgagctgaat
gcccgcgccatgctggcccggctggcgagccgctccagtggcggcgcggcggcggcggcg
cgtaaaaaagatcagcttaacggcaaggtgtcggcggatgtacgtaataacgcgctgctg
atccgcgatgacgaaaagcgccgggacgaataccagcagttgatcgacaagatcgacgtg
ccgcaaaatctggtcaacatcgatgcgatcatcctggatgttgatcgcaccgcgctctca
aggctggaggccaactggcagggcaaactgggcgcggtcaccggcggcgccaacatgatg
tccggctccagcacgctgtttgtcagcgatttcaaacgcttcttcgccgatattcaggcg
ctggaaggcgaaggcaccgcgtcgatcgtcgccaatccgtcggtgctgacgctggaaaac
cagccggcggtgatcgatttcagccgcaccgcttttatcaccgccaccggcgagcgggtg
gccaacgtacaaccggtgaccgccggcaccagcctgcaagtgacgccgcgcgtggtcggc
cgcggcagcctgaacagcatccaactggttatcgacattgaagacggtcaggtggaaacc
aataccgaaggcaccgcctccggcgtgaagcgcggcaccgtcagcacgcaggcgctgatt
ggcgaaaaccgggcgctggtgctgggcgggttccatgtggaagagagcggcgatcgtgat
aagcgcataccgctgctgggcgatattccctggatcggcaaactgtttacctcgcgccag
cacgaagtgtcccgtcgcgaacggctgtttatccttaccccgcacctgattggcgatcag
aacgatcccacccgattcgtgtcggcggataaccgtcgccagctcaatgatgcgatgggg
cgtgtggcgcagcgcaacagcaaaaccgatctgttcggcatggttgaaagcgccatgcgc
gatctggccagcggccagacgcccgccggattcactatcgacggcagcggggcgcgcctg
tcggagctttgccgcacatcgccgtcgctgagttatcagagcaatcgccaccagtggtac
agcaatctgaccctcagtctggcggtgggggtggtgaaaaacaccggcacccgtcctcag
cgttttgacgaagccaactgcgccagcagccgcacgctggcggtggccgcctggccgaaa
accacgctggcgcccggcgaatccaccgaggtgtatctggcgctgttgccggccaaaaat
gcgcagccatcacgcgcgtcattgatcaaaccctga

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