KEGG   Dickeya dianthicola: DDI_2192
Entry
DDI_2192          CDS       T05141                                 
Name
(GenBank) Type III secretion inner membrane channe protein (LcrD,HrcV,EscV,SsaV)
  KO
K03230  type III secretion protein V
Organism
ddq  Dickeya dianthicola
Pathway
ddq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DDI_2192
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddq02044]
    DDI_2192
Secretion system [BR:ddq02044]
 Type III secretion system
  Type III secretion core apparatus
   DDI_2192
SSDB
Motif
Pfam: FHIPEP NA37
Other DBs
NCBI-ProteinID: ATO33360
LinkDB
Position
2222866..2224968
AA seq 700 aa
MAVLIVWLNRFAMSAMQRSEVVGAVIVMAIVFMMIIPLPTGLIDVLIAFNICISSLLIVL
AMYLPKPLAFSTFPAVLLLTTMFRLALSISTTRQILLQQDAGHVVEAFGNFVVGGNLAVG
LVIFMILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIDAQQARQRRE
NLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIGGFAIGVLQNGMAAGDAMHIYSVLT
IGDGLIAQIPALLISLTAGMIITRVSADGQKTDNNIGREIAEQLTSQPKAWIISSVGMLG
FALLPGMPTLVFLIISLASLGSGLFQLWRVKQSGLQDALLADDSLPAEQNGYQDLRRFNP
TRAYLLQFHTVWQGAAAAAVLVQDIRRLRNRLVYHFGFTLPSFDIEFTTNMPEDEFRFCV
YEIPQLRASFGVPLLAVPRGQLPEATLDDGMMLGLSARDEHHLLWLTPEHPLLQQPELSP
WSPAALILSRMENAIHRSGAQFIGLQETKSILAWLESEQPELAQELQRIMPLSRFASVLQ
RLASERVPLRSVRPIAEALIEIGQHERDINALTDYVRLELKAQICHQYSQDDSLTVWLLT
PETEELLRDALRQTQNDTFFALTQEYAATLLGQLRHAFPPMVPPSALILVAQDLRSPLRI
LLQDEFHHVPVLSFTELESHLSINVAGRIDLQDRVDPFNA
NT seq 2103 nt   +upstreamnt  +downstreamnt
atggctgtgctgatcgtctggcttaaccgtttcgccatgagcgccatgcagcgctccgag
gtggtgggcgccgtcatcgtcatggcgattgtgttcatgatgatcatcccgctgccgacc
ggccttatcgacgtgctgattgcgttcaacatctgtatttcatcactgctgatcgtgctg
gcgatgtacctgcccaaaccgctggcgttttccactttcccggcggtgctgctgctgacc
accatgttccggctggcgctgtccatctccaccacccggcaaattctgctgcaacaggat
gcgggtcacgtggtggaggcgttcggcaacttcgtggtgggcggtaatctggcggtcggc
ctggtgatcttcatgatcctgacggtggtgaactttctggtgatcaccaaaggctcggag
cgcgtggcggaagtggcggcgcgtttcacgctggatgccatgcccggcaaacagatgtcc
atcgacagcgacctgcgcgccgggttgatcgacgcccagcaggcccgccagcgacgggaa
aacctggccaaagagagccagctgttcggcgcgatggacggggcgatgaagttcgtcaaa
ggggatgccatcgccagcctggtgatcgtgttcatcaacatgatcggcggcttcgccatc
ggcgtgttgcaaaacggcatggccgccggcgacgccatgcacatctattcggtgctgacc
atcggcgacggcttgatcgcccagattccggcgctgctgatttcactgaccgccgggatg
atcatcacccgcgtctccgccgacggccagaaaacggacaacaatattggccgggagata
gccgaacaactgaccagccagcccaaggcgtggattatctcgtcggtgggcatgttgggg
tttgcgctgctgcccggtatgccgacgctggtgtttctgataatcagcctggcgtcgctc
ggcagcgggttattccagttgtggcgcgtcaaacagagcggtttgcaggatgcgctgctg
gcggatgacagcctgcccgccgaacagaacggctatcaggatttgcggcgtttcaacccg
acccgcgcctacctgttgcaatttcataccgtgtggcagggcgcggcggccgccgcggtg
ctggtgcaggacatccgccgtctgcgcaaccggctggtgtatcactttggctttacgctg
ccgtcgttcgatatcgagttcaccaccaacatgccggaggacgagttccgcttctgcgtg
tatgaaatcccgcagttgcgggccagcttcggcgtgccgttgctggcggtgccgcgcgga
caactgccggaagcgacgctggacgacggcatgatgctcggcctgtccgcccgcgacgaa
caccacctgctgtggctgacgccggaacatccgctattgcagcagccggaactgagcccg
tggagcccggccgcgctgatcctgagccgcatggagaatgcgattcatcgcagcggcgcg
caatttatcggcctgcaggaaaccaaatcgatcctcgcctggctggagagcgaacaaccg
gagctggcgcaggaactgcaacgcatcatgccgctatcgcgcttcgccagcgtactgcag
cggctggcgtcggaacgggtgccgctgcgctcggtacggccgattgccgaagcgctgatc
gaaatcggtcagcatgagcgcgacatcaacgccctcaccgattatgtccggctggagctg
aaagcccagatttgccaccagtacagtcaggacgacagcctcaccgtctggctgctgacg
ccggaaaccgaagagttgctgcgcgacgcgctgcgccagacgcagaacgacaccttcttc
gcgctgacccaggaatacgccgccaccctgctcggccagttgcgtcacgccttcccgccg
atggtaccgccgtcggcgctgattctggtggcgcaggacctgcgcagcccgctgcgcatt
ctattgcaggacgaattccatcacgtgccggtgctgtcgttcaccgaactggaatcgcac
ctgtcgatcaacgtcgcgggccgcatcgacctgcaagaccgggttgacccctttaacgca
tag

DBGET integrated database retrieval system