Dickeya dianthicola: DDI_2219
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Entry
DDI_2219 CDS
T05141
Name
(GenBank) Spermidine Putrescine ABC transporter permeas component PotB
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ddq
Dickeya dianthicola
Pathway
ddq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDI_2219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_2219
Transporters [BR:
ddq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DDI_2219
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ATO33387
LinkDB
All DBs
Position
complement(2250990..2252261)
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AA seq
423 aa
AA seq
DB search
MSQNEMLKAEPPAGGEGNRTSLKQQLHQAQARYQKRSLVLIAPLFLFILVSFLFPILSIL
GKSVSNPDLRVSMPTTIEAMRQWSGKDVPDESVFRALVSDLRNARSTGQVAAITKRLGYE
DGQYRTLITRTLRKLPSDEQQGLREQLIADQPMWGELTTWKTIDRASRPFTSYYLLAVFD
HKVDSQTDKVVAQPADQALYVDVLLRTLLMAGVVTLLCVALGYPLAYWLAKQPDNRANLL
MILVLLPFWTSLIVRTASWIVLLQSGGVINRSLMGLGIIDEPLVLVFNRIGVYISMTHIL
LPFLVLPLYAVMKGISPNYVRAAISLGAHPFLAFWRVYVPQTYAGVTAGALLVFMMAIGY
YITPALLGGPGDQMLSYFVAFFTNTTMNWGMAAALGTQLLVIVVLLYVVYIRVTRTDADA
AAR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaacgaaatgttgaaggcagagccgcctgccggcggcgaggggaatcgcacc
agtctcaaacagcagttgcatcaggcacaggcccgctatcagaaacggtcgctggtgctg
attgcgccgttgttcctgttcattctggtcagttttctgttcccgatactgtcgattctg
ggcaaaagcgtgtccaacccggacctgcgcgtcagcatgccgaccactatcgaggcgatg
cggcaatggtccggcaaggatgtgccggatgagagcgtgttccgggcgctggtgagcgat
ctgcgcaatgcccgcagtaccgggcaggtcgccgctatcaccaaacggctgggttatgaa
gacggtcaataccgcacattgatcacccgcacgctgcgcaaactgccgtcggatgaacag
caagggctgcgcgaacaattgattgccgaccaaccgatgtggggcgagctgaccacctgg
aaaaccatcgaccgcgcgtcgcggccgttcaccagctactacctgctggcggtgttcgac
cataaggtggactcgcagaccgacaaggttgtggcgcaaccagcggatcaggcgctgtat
gtcgatgtgctgctgcgcacgttgttgatggcaggggtggtcacgctgctgtgtgtggcg
ctgggctatccgctggcttactggctggcgaaacaaccggataatcgcgccaacctgctg
atgattctggtgttgctgccgttctggacatcgttgattgtgcgtaccgccagttggatt
gtgctgttgcagtccggcggggtgatcaaccgttcgctgatggggctgggcatcattgat
gagccgctggtgctggtgtttaaccgtatcggcgtctacatctcgatgacccacattctg
ttgccgttcctggtgttgccgttgtatgcggtgatgaaaggcatttcgcccaactatgtg
cgggcggcgatttcactgggcgcgcatccgtttctggcgttctggcgggtgtatgtgccg
caaacctacgccggggtgaccgccggcgcgctgctggtgttcatgatggcgattggctac
tacattacgccggcgctgctgggcgggccaggcgaccagatgctcagctattttgtagcg
tttttcaccaacaccaccatgaactgggggatggcggcggcgctgggaacacaactgctg
gtgatcgtggtgctgctgtatgtggtgtatatccgcgtcacccgcaccgacgccgacgcg
gcggcgcgttaa
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