Dickeya dianthicola: DDI_2423
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Entry
DDI_2423 CDS
T05141
Name
(GenBank) Cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00450
Selenocompound metabolism
ddq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DDI_2423
Enzymes [BR:
ddq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
DDI_2423
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
DDI_2423
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ATO33591
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Position
complement(2451062..2452315)
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AA seq
417 aa
AA seq
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MNYSIDHHPVDHYPIDRVRADFPILQQAVNGQPLAYLDSAASAQKPLAVIDRERDFYLRE
YAAVHRGIHTLSARATSAMEEVRAKIATFIHAASAEDIVFVRGTTEAINLVANSYGRIAF
EPGDNVVISEMEHHANIVPWQMLAQARGLTLRVLPITDDGELDMAQLPALLDERTRLVAV
TQVSNVLGTVNPLTEIIRQAHACGAKVLVDGAQAVMHRAVDVQALDCDFYAFSGHKLYGP
SGIGVLYGKSELLQAMPPWEGGGAMIREVSLTQGTTYALPPWRFEAGSPHVAGIIGLGAA
LDYVSALGIDAVQAHEDSLMRYALASLAEVPTLRLYGPAQRQGVIAFNLGRHHAFDVGSF
LDQYGIAIRTGHHCAMPLMSRYGVPSMCRASLALYSCQDEIDRLVAGLHRIHRLLGE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgaattattccatcgatcatcatcctgtcgatcattatcctatcgatcgggtgcgggcg
gattttccgattttgcagcaagcggtcaacgggcagccgctggcctatctggacagcgcc
gccagcgcgcagaaaccgctggcggttatcgaccgtgaacgagatttctacctgcgcgaa
tatgccgcggtgcatcgcggcatccatacgctgagcgcccgcgccaccagcgcgatggaa
gaggtgagggcgaagatcgctacctttatccatgccgcatcggcggaagatatcgtgttt
gtgcgcggcaccaccgaagccatcaatctggtggccaacagttacgggcgtatcgcgttt
gagcccggcgacaacgtggtgatcagcgaaatggagcaccacgccaacatcgtgccctgg
cagatgctggcgcaggcgcgcgggctgacgttgcgggtgctgccgatcaccgacgacggc
gaactggatatggcgcaactgccggcattgctggatgaacgcacccggctggtggcggtg
acgcaggtttccaacgtgctgggtacggttaacccgctgacggagatcatccgtcaggca
catgcctgtggggcgaaagtgctggtggatggcgcgcaggcggtgatgcaccgggccgtc
gatgtgcaggcgctggattgcgatttctacgcgttttccggccataaactgtatggcccg
tcaggcattggcgtactgtacggcaaaagcgaactgttgcaggcgatgccgccgtgggaa
ggcggcggcgccatgatccgcgaggtcagcctgacgcagggcaccacctatgctttgcca
ccgtggcgctttgaggccggctcgccgcatgtcgccgggattatcgggctgggggcggcg
ctggattatgtctccgcgctggggattgatgcggttcaggcgcatgaggactcgctgatg
cgctatgcgctggcgtcgctggccgaggtgccgacgctccgtctgtacggcccggcacag
cgtcagggggtgatcgccttcaatctggggcgtcaccacgcgttcgatgtcggcagcttt
cttgaccagtacggcatcgccattcgcaccggccaccattgcgccatgccgctgatgagc
cgttatggcgtgcccagcatgtgccgcgcatcgctggcgctctattcctgtcaggatgag
attgaccgcctggtggcgggcctgcaccgtatacatcgtctgttgggcgagtaa
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