Dickeya dianthicola: DDI_2923
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Entry
DDI_2923 CDS
T05141
Name
(GenBank) Ribose operon repressor
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddq03000
]
DDI_2923
Transcription factors [BR:
ddq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DDI_2923
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_7
HTH_38
HTH_3
Crp
HTH_Tnp_ISL3
HTH_31
HTH_Crp_2
Trp_repressor
DUF3853
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ATO34091
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All DBs
Position
3026295..3027275
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AA seq
326 aa
AA seq
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MSIQKIARLAGVSVATVSRVLNNQDSVKPQNRERVLNAIQQSNYQPNLLARQLRTAKSHM
LLVMVSNIANPFCADVVKGIESEAERNGYRILLCNSGSDTARAKSSLSLLSGKMVDGVIT
MDALSRLPELTTIIGDAPWVQCAEYADAAAVSSVGIDDRLASRFVLEHLLKNNRQRIAMI
NHDLNYKYAQLREQGYREMIAEHALHYDSVIYASELSYQAGKKAMLALLDEEIRPDAVFA
VSDTLAAGALKAIEDTGLQVAKDIAVIGFDGTELSYITSPQLSTVQQPSQEIGRQAVKLL
LQKINDPDSLPEKRILDWQFISRASG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcaaaaaatcgcacgacttgccggcgtttccgtagcaaccgtatcgcgggtg
ctgaataatcaggactccgttaagccccaaaaccgtgaacgtgtactgaacgccatccaa
caaagcaattaccagcctaatttactcgccagacaattgcgcaccgcgaaaagtcatatg
ctgctggtcatggtttccaatatcgccaatccattctgcgccgatgtggtaaaaggcatt
gaatccgaagccgagcggaacggataccgcattctgttatgtaattccggctcggatacg
gcgcgggcaaaatccagcctgtcgttattgtccgggaaaatggtggatggggtgattact
atggacgcgttatcccgtctgccggaactgaccaccataataggcgacgcaccctgggta
cagtgtgccgaatacgccgatgccgcggcggtttccagcgtcggcattgatgacaggctg
gcctcccgctttgtgcttgagcacctgcttaaaaataaccgccagcggattgccatgatc
aatcacgacttgaattataaatatgcccaactgcgggaacagggttatcgggaaatgatt
gccgagcacgcacttcactatgactcggttatttatgccagtgaactcagttaccaagcg
gggaaaaaagccatgctcgcgttgcttgatgaagaaatacgaccagacgcggtatttgcc
gtgtcagacaccctggcggccggagcgttaaaagcgattgaagacacgggattacaggtg
gcaaaagatatcgccgtgatcggttttgacggtaccgaattaagctatattacctcgccg
caattaagcaccgtccagcaaccttcacaggaaatcggccggcaggccgtcaaattgctg
ctgcaaaaaatcaacgatcctgacagccttcctgaaaaaagaatcctcgactggcagttt
atttcccgggcatccggttag
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