Dickeya dianthicola: DDI_3085
Help
Entry
DDI_3085 CDS
T05141
Name
(GenBank) Multimodular transpeptidase-transglycosylase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00550
Peptidoglycan biosynthesis
ddq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DDI_3085
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ddq01003
]
DDI_3085
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddq01011
]
DDI_3085
Enzymes [BR:
ddq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DDI_3085
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DDI_3085
Glycosyltransferases [BR:
ddq01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DDI_3085
Peptidoglycan biosynthesis and degradation proteins [BR:
ddq01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DDI_3085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
PBP1b_C
PBP1_TM
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ATO34253
LinkDB
All DBs
Position
complement(3190994..3193327)
Genome browser
AA seq
777 aa
AA seq
DB search
MSKRPRKKRRWLGWLIRLFLIFVVVMSIYGVYLDGEIRSRIDGKVWQLPAAVYGRMVNLE
PGMAYSKKEMVNLLEGMQYREVSRITRPGEFTVQANGIEILRRPFDFPDGKEGQIHAKMI
FSNDRLSQIQNMDNQRNFGFFRLDPKLITMLQSPNGEQRLFVQRSGFPDLLVQTLIATED
RHFYEHDGISFYSIGRALIANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMA
LIMDYRYSKDRILELYLNEVYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQAMLVGMV
KGASLYNPWRNPQVTLERRNLVLKLLQNQQVIDEDLYNMLSARPLGVQPKGGVISPQPAF
MQMVRQELQQRLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARGVKDLESAM
VIVDRFSGEIRAMVGGSDAQFAGFNRAMQARRSVGSLAKPPTYLTALSMPDRYRLNTILA
DEPISLKQPNGTVWEPKNYDREFRGRVMLVDALTNSLNVPTVNLGMAVGLDQVSDTLQKL
GIPQNQIQAVPAMLLGAISLTPMEVAQEYQTIASGGNRASLSALRSVIAEDGKVLYQSFP
QAERAVPSQAAYLTLYGMQQVVERGTSRSLTVKFGNYHLAGKTGTTNDLRDSWFAGVDGK
EVAITWVGRDNNGPAKLTGANGALTIYRRYLENQTPLPLMLTPPEGITTMSVDGSGNLIC
NGSAGRALPVWTDNPQALCQASQPAVQQPANAPNGQPQQNQQEGGSVPDWIKQMFGQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcggccgcgtaagaaacgccgctggctggggtggcttatccgtttgttcctg
atttttgtggtggtgatgtcgatttacggcgtttacctcgacggagaaattcgcagtcgc
atcgacggcaaagtgtggcaactgccggcggcggtgtatggccgcatggtcaaccttgag
ccgggcatggcctacagcaagaaagagatggtcaatctgctggaaggcatgcaataccgc
gaggtcagccgcattacccggccgggcgaattcacggtgcaggccaacggcatcgaaatt
ctgcgtcgtcctttcgacttcccggacggcaaggaaggccaaatccacgccaaaatgatc
ttcagcaatgaccggttgtcgcagatccagaatatggataatcagcgcaatttcggtttc
ttccggctcgatccgaaactgatcaccatgttgcagtcgccgaacggcgaacagcggctg
tttgtgcagcgttccggtttccccgacctgctggtgcaaacgctgatcgccaccgaagac
cgtcatttctacgagcatgacggcatcagtttctactccatcggccgcgcgctgatcgcc
aacctaacggccggccgggcggtgcagggcggcagtacgctgacccagcagctggtgaaa
aacctgttcctgaccaacgaacgctcgttatggcgtaaagctaacgaagcctacatggcg
ttgatcatggattaccgctacagcaaggatcgcattctggagctgtatctgaacgaggtg
tacctcggtcagagcggcaacgatcagatccgcggttttccgctggccagcctttactat
ttcggccggccggtcaacgagctgagcctcgaccagcaggcgatgctggtggggatggtg
aaaggggcgtcgctgtataacccgtggcgcaacccgcaggtgacgctggagcgccgtaat
ctggtgctgaaactgctgcaaaaccagcaggtcatcgacgaagatctttacaacatgttg
agcgcccgcccgctgggcgttcagccgaaaggcggggtgatcagcccgcagccggcgttt
atgcagatggtgcgccaggagttgcagcagcggctgggcgacaaggtcaacgatctgtcc
ggggtgaaaatcttcactacgctggatccggtgtcgcaggatgcggcggaaaaagcggtg
gaagacggcattccggcgctgcgcgcggcgcgcggcgtcaaggatctggaatcggcgatg
gtgattgtcgatcgcttcagcggtgagattcgggcgatggtaggcggttccgacgcccag
ttcgccggtttcaaccgcgctatgcaggcgcgccgttcggtcggttcgctggcgaaaccg
ccgacttacctgacggcgctcagcatgccggatcgctaccgcctcaacaccattctggcc
gatgagccgatttcgctcaaacagcccaacggcacggtctgggagccgaaaaactacgat
cgtgagttccgtggccgggtgatgctggtggacgcgctgacgaattcgctcaacgtgccg
acggtcaatctggggatggcggtcgggctggatcaggtcagcgatacattgcagaagctg
gggatcccgcaaaatcagattcaggcggtgccggcgatgttgctcggcgccatcagcctg
acgccgatggaagtggcgcaggaataccagactatcgccagcggcggcaaccgtgcgtcg
ttgtctgcgctgcgttcggtaatcgccgaagacggcaaggtgctgtatcagagcttcccg
caggccgaacgagccgtgccgtcacaggccgcctacctgacgttgtacggtatgcagcag
gtggtggagcgcggcacctcgcgctcgctgacggtgaaattcggcaattaccacctggcg
gggaaaaccggtaccaccaacgacctgcgcgacagctggtttgccggcgtcgacggcaag
gaagtggcgatcacctgggttggccgcgacaacaatggcccggcgaaactgaccggcgcc
aatggcgcgctgactatctatcgccgctatctggaaaaccagacgccgttgccgctgatg
ctgacgccgccggaaggcattaccaccatgtcggtggacggcagcggcaacttaatctgt
aacggcagcgccggccgggcattgccggtgtggaccgataacccgcaggcgttgtgtcag
gccagccagccagcggtgcaacagccggccaatgcgccgaatggtcagccgcaacaaaat
cagcaggaaggcggcagcgttcccgactggatcaagcagatgtttgggcagtaa
DBGET
integrated database retrieval system
