Dickeya dianthicola: DDI_3122
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Entry
DDI_3122 CDS
T05141
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ddq03110
]
DDI_3122
Chaperones and folding catalysts [BR:
ddq03110
]
Heat shock proteins
HSP100
DDI_3122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Clp_N
Sigma54_activat
TniB
ATPase_2
bpMoxR
nSTAND3
AAA_14
IstB_IS21
AAA_7
AAA_24
NBD_SMAX1
NACHT
DUF815
AAA_19
T2SSE
Torsin
HEPN_Toprim_N
Motif
Other DBs
NCBI-ProteinID:
ATO34290
LinkDB
All DBs
Position
complement(3228998..3231403)
Genome browser
AA seq
801 aa
AA seq
DB search
MSRLKSEIGQAIGRLPQVEGTGGDVQPSSELVRTLNICDKLAQKKGDTFISSELFVLAVF
ESRSALGDLLKNAGATQQNVTQAIEQVRGGQQVNEQSAEDQRQALKKFTIDLTERAEQGK
LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKR
VLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAG
NMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKER
YELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLD
RRIIQLKLEQQALKKESDEASLKRLEILNAELEQKEREYSKLEEEWKAEKASLTGTQNIK
AALEQAKISLEQARRQGDLGQMSELQYGKIPELEKQLAAATQVEGKTMRLLRNRVTDAEI
AEVLARWTGIPVSRMLESEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNR
PIGSFLFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGY
EEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM
TSNLGSDLIQERFGEMNYNQMRDMVLSVVSHHFRPEFINRIDEVVVFHPLGKSHITSIAQ
IQLQRLYKRMEERGYTVTVSDAALELLGRSGFDPVYGARPLKRAIQQMIENPLAQQILSG
ALVPGKQVALDADDEAIVIRQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtcttaaaagtgaaattgggcaggcaatcggccgattaccgcaggtggaaggc
accggtggtgatgttcaaccgtccagtgagctggtacggacgcttaatatctgcgacaag
ctggcgcagaaaaagggcgacacgttcatttcttcagaattattcgtgctggcggtattt
gaatcgcgcagcgcgttgggtgatctgctaaaaaatgcaggtgccactcaacagaatgtg
actcaggctatcgagcaggttcgcggcgggcagcaggtcaacgagcagagcgccgaagac
cagcgtcaggcactgaaaaaattcacgattgatctcacggagcgtgccgaacagggcaag
ctggacccggtgattggccgtgatgaggaaatccgccgtactatccaggtgttgcagcgc
agaactaaaaacaacccggttttgatcggtgaacccggcgtcgggaaaactgcgattgtc
gaagggctggcgcagcgtatcgtcaatggtgaagttcctgaagggctgaaaaataaacgc
gtgctggctctcgatatgggcgcgctggtggcgggagccaaatatcgcggtgagtttgaa
gagcgtctgaaaggcgtgttgaacgacctgtctaaacaggaaggcaacgtcatcctcttt
atcgacgaactgcacactatggtcggtgccggcaaggcagacggcgcgatggatgccggc
aacatgctcaagccggcgctggcgcgcggcgagttgcactgcgtaggggcgacgacgctg
gatgagtatcggcaatacattgaaaaagatgccgcccttgagcgtcgtttccagaaagtg
tttgtcgctgaaccgaccgttgaagataccatcgctattctgcgtggcctgaaagagcgt
tatgagctgcatcatcacgtgcaaatcaccgatccggcgattgttgcggcagcgatgcta
tcgcaccgctacatttctgatcggaaattgccggataaagcgatcgatcttattgatgaa
gccgcatccagcatccgtatgcagattgactccaaaccggagccgctggaccgcctcgat
cgccggattatccagttgaagctggaacaacaggcgttgaaaaaagagtctgatgaagcc
agcctgaaacgtctggaaattttgaatgccgagctggagcagaaagagcgcgaatactcg
aaactggaagaagagtggaaagcggaaaaagcgtcgttgaccggtacgcaaaacattaag
gcggcgctagagcaggcaaaaatttctctggaacaggcgagacgccagggggatttaggc
cagatgtcggaattgcagtacggcaaaattcctgaactggaaaaacagctggctgccgcc
acacaggttgaaggcaaaaccatgcggctgcttcgtaatcgggtaacggatgccgagatt
gccgaagtgcttgcccgctggaccggtattccggtttcacggatgctggaaagcgagcga
gaaaaactgttgcgtatggagcaggaactgcaccaacgggtgattggacagaacgaggcg
gtggaagctgtcgccaactccattcgccgtagtcgcgccggattgtcagatcccaaccgt
cctatcggctcgtttctgttcctcgggccgaccggcgtgggtaaaaccgaattgtgtaaa
acgctggcgtcgttcctgttcgatagcgatgatgcgatggtccgtattgatatgtccgaa
ttcatggagaaacattcggtttcccgtctggtgggtgcgcctccgggatatgtcggttat
gaagagggcgggtatctgaccgaagcagtacgccgccgcccttattccgtcatcctgctg
gatgaagtggaaaaagcgcaccccgacgtgtttaacattctattacaggtgttagatgac
ggccgcctgactgacgggcaaggccgcacagtagatttccgcaacacggtggttatcatg
acttccaacctgggctcggatctgattcaggaacggtttggtgagatgaattacaaccag
atgcgcgacatggtgttaagtgtcgtcagccaccatttccgtccggagtttatcaaccgt
atcgatgaagttgtggtatttcacccgctgggtaaaagccatattacttcaattgcgcag
attcagttgcagcggctctataaacggatggaagagcgcggctataccgttaccgtttcc
gacgcggcgctggaattactcggtagatcaggttttgacccggtgtacggtgcccggcca
ttgaaacgcgccatccaacagatgatagagaatccactggcgcaacagatattgtcaggg
gctttggttcccggcaagcaggttgccctggatgcggatgacgaggcgattgttattcga
cagtaa
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