Dickeya dianthicola: DDI_3262
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Entry
DDI_3262 CDS
T05141
Name
(GenBank) Prolyl-tRNA synthetase, bacterial type
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DDI_3262
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddq01007
]
DDI_3262
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddq03016
]
DDI_3262
Enzymes [BR:
ddq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
DDI_3262
Amino acid related enzymes [BR:
ddq01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DDI_3262
Transfer RNA biogenesis [BR:
ddq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DDI_3262
Prokaryotic type
DDI_3262
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GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
ATO34430
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Position
3375447..3377165
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AA seq
572 aa
AA seq
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MRTSQYMLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREE
MDNAGAIEISMPVVQPADLWQESGRWEQYGPELLRFVDRGDRPFVLGPTHEEVITDLIRN
EISSYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQVTYDAMYAA
YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLASSGEDDIVFSTASDYAANIELAEAVA
PEHGLSAPTQAMTLVDTPNAKTIAELVEQFAVPVEKTVKTLLVKATEESGHKLVALLVRG
DHELNEVKAEKLELVASPLAFATEEEIRATVKAGPGSLGPVNLPVPVIVDRTVAAMSDFS
AGANIDGKHYFGINWERDTALPQVADIRNVVEGDRSPDGKGTLLIKRGIEVGHIFQLGKK
YSEALKATVQGEDGRNQTLTMGCYGIGVTRVIAAAIEQNYDDRGIIWPDAIAPFQVAILP
MNMHKSFRVQEVAEGIYQQLRANGIDVLLDDRKERPGVMFADMELIGIPHTIVIGDRNLD
NDEIEYKHRRKGEKEMIKAGDIVEFLLSQCAR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaagtcaatacatgctctccacgctgaaggagacgcccgccgatgccgaagtc
atcagccatcagttgatgctgcgagccgggatgattcgtaaactggcttccggcctttac
acctggttgccgaccgggttgcgggtgctgaaaaaagtcgaaaacatcgtgcgtgaagaa
atggacaatgccggcgccatcgaaatttcgatgccggtggttcaacccgccgacctgtgg
caggaaagcggccgctgggagcagtatggcccagaactgttgcgctttgttgaccgtggc
gaccgcccgtttgtactcggcccaacgcatgaagaagtgattacggatttgatccgtaac
gaaatcagctcctacaaacagttaccgctgaatttctaccagatccagaccaaatttcgt
gatgaagtccgcccgcgctttggcgttatgcgcgcccgcgagttcctgatgaaggatgcg
tattcgttccacaccacgcaggaatccttgcaggttacttacgacgccatgtatgccgcc
tacagcaagattttcagccggatggatctcgatttccgcccggtacaggccgataccggc
tccatcggcggcaatgcatcccatgaattccaggtgctggccagcagcggcgaagacgac
atcgtgttctctaccgcgtcggattacgccgccaatattgaattagcggaagccgtcgcg
ccggaacacggcctgagcgcgccgactcaagccatgacgctggtggataccccgaacgcc
aaaaccatcgccgagctggtggaacaattcgccgtgccggtggaaaaaaccgtcaagacc
ctgctggtgaaagcgaccgaagaaagcggccataagttggttgcgctgctggtgcgtggc
gatcatgaactgaacgaagtcaaagcggaaaaactggagctggtcgccagcccgctggcc
ttcgccactgaagaagagatccgggcaacggtgaaggcgggtcctggctcgctgggaccg
gtgaatctgccggtgccggtcattgtcgaccgtaccgtggcggcgatgagcgatttcagc
gccggcgccaatatcgacggcaagcactacttcggcattaactgggaacgcgataccgct
ctgccgcaggttgccgacatccgtaacgtggtggaaggcgatcgcagcccggacggcaaa
ggcacactgcttatcaaacgtggtattgaagtcggtcacatcttccaactgggtaaaaaa
tactccgaagcgttaaaagcgacggttcagggcgaagacggtcgcaaccaaaccctgact
atggggtgttatggaatcggcgtaacgcgcgtgatcgccgccgctattgaacagaactac
gacgaccgcggcattatctggcctgacgctatcgcgccgttccaggtggctattctgccg
atgaacatgcataaatccttccgcgtgcaggaagtggccgaaggcatctatcagcagtta
cgcgcaaacggtattgatgtgctgctagacgatcgtaaagagcgtcctggcgtgatgttt
gccgatatggaattgatcggtattccgcatactatcgtgattggcgatcgtaacctcgac
aatgatgagatcgaatataagcaccgtcgtaaaggtgagaaagagatgatcaaagccggc
gatatcgttgagtttttgttgtctcagtgtgcccgataa
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