Dickeya dianthicola: DDI_3375
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Entry
DDI_3375 CDS
T05141
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00300
Lysine biosynthesis
ddq00470
D-Amino acid metabolism
ddq01100
Metabolic pathways
ddq01110
Biosynthesis of secondary metabolites
ddq01120
Microbial metabolism in diverse environments
ddq01230
Biosynthesis of amino acids
Module
ddq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DDI_3375
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DDI_3375
Enzymes [BR:
ddq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DDI_3375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ATO34543
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Position
complement(3496221..3497483)
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AA seq
420 aa
AA seq
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MPHDLNDLSHALNAQSLRALPERFGCPLWAYDAETIIARIGQLRQFDTIRFAQKACSNIH
ILRLMRQQGVKVDSVSLGEIERALAAGFEPGTDAHEIVFTADVLDDATLQRVHELNIPVN
AGSIDMLHQLGERSPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSR
YRLKLVGIHMHIGSGVDYGHLEQVCDAMVQQVLAVGQDLDAISAGGGLSIPYRHGGEHID
TQHYYGLWNRAREQIAAHLEHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDA
GFSDLMRPAMYGSYHHITLLPGDGRDLSQCARRDSVVAGPLCESGDVFTQQSGGGVETLP
LPPAQVGDYLVFHDTGAYGASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLALERV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacatgacctgaatgacctttcccatgcgctgaacgcccagagcctgcgcgcgctg
ccggagcgctttggctgcccgctgtgggcctacgacgccgagactatcattgcgcgcatc
ggtcagctgcgccagttcgacaccatccgttttgcgcaaaaagcctgctcgaatattcat
attctgcgcctgatgcgccagcagggcgtgaaggtggattcggtatcgctgggggaaatc
gaacgcgcgctggcggccgggtttgagccgggcaccgacgcgcacgagatagtgtttacc
gccgatgtgctggatgacgccacgctgcaacgggtacatgagctgaacattccggtgaat
gccggttccatcgacatgctgcatcaactgggcgagcgttcgccgggtcacccggtgtgg
ctgcgtattaatccggggttcggccacggccacagtcagaagaccaacaccggcggcgaa
aacagcaaacacggcatctggtatgccgatttgccgcaggcgctggaggcgttgagccgt
tatcgcctgaagctggtgggcatccacatgcatatcggctccggcgttgattacgggcat
ctggagcaggtgtgcgatgcgatggtgcagcaggtgctggcggtcgggcaggatctggac
gccatttccgccggcggcgggctgtcgattccgtatcgtcacggcggcgagcacattgat
actcaacactattatgggctgtggaaccgggcgcgggagcagatcgccgcgcatctggag
cacccggtagcgctggaaatcgagccggggcgttttctggtggcggagtccggcgtgctg
gtggcgcaggtgcgcgcggtaaaagacatgggcagccgccactttgtgctggtggacgcc
ggattcagcgacctgatgcgcccggcgatgtacggcagttaccatcacatcaccctgttg
ccgggcgacgggcgtgatctaagccagtgcgcgcggcgagacagcgtggtggccggcccg
ttgtgcgaatccggcgatgtgtttacccagcagtcgggcggcggggtggaaacgctgccg
ctgccgccggcgcaggtgggggattatctggtgtttcatgacaccggcgcttacggcgcg
tcaatgtcgtccaactacaacagccgcccgttgattgccgaagtgctgtttgaacagggc
cagccgcggctgatccgccgccgccagacgctggacgaactgctggcgctggagcgggtg
taa
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