Dickeya dianthicola: DDI_3645
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Entry
DDI_3645 CDS
T05141
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00260
Glycine, serine and threonine metabolism
ddq00270
Cysteine and methionine metabolism
ddq00680
Methane metabolism
ddq01100
Metabolic pathways
ddq01110
Biosynthesis of secondary metabolites
ddq01120
Microbial metabolism in diverse environments
ddq01200
Carbon metabolism
ddq01230
Biosynthesis of amino acids
Module
ddq_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
DDI_3645
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DDI_3645
00270 Cysteine and methionine metabolism
DDI_3645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddq04147
]
DDI_3645
Enzymes [BR:
ddq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
DDI_3645
1.1.1.399 2-oxoglutarate reductase
DDI_3645
Exosome [BR:
ddq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DDI_3645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
ACT_AHAS_ss
NAD_binding_2
ACT
XdhC_C
AlaDh_PNT_C
ACT_4
AdoHcyase_NAD
UDPG_MGDP_dh_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ATO34813
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All DBs
Position
complement(3762730..3763962)
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AA seq
410 aa
AA seq
DB search
MAKVSLEKDKIKFLLLEGVHPNALENLRAAGYTNIEYHKGALDPEALKASIRDAHFVGIR
SRTQLTEEIFAAAEKLVAVGCFCIGTNQVELSAATKRGIPVFNAPFSNTRSVAELVIGEL
LLLLRGIPAANAKAHRGIWHKQAVGCFEARGKKLGIIGYGHIGTQLGILAESLGMHVYFY
DIESKLPLGNAQQVRHLSDLLNMSDVVSLHVPETDSTQNMIGADELALMKPGSILINASR
GTVVDIPALSNALANKHLSGAAIDVFPQEPAANSDPFLSPLCEFDNVILTPHIGGSTEEA
QENIGGEVAGKLVKYSDNGSTLSAVNFPEVSLPTHSDRASRLLHIHENRPGIMTQINNIF
AAQSINIAAQYLQTSPEIGYVVIDVETDGADTALQLMKSIPGTIRARLLF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggtatcactggaaaaagacaagattaagtttctgctgttggagggggtacac
ccgaatgcgctggaaaatctgcgcgctgcgggttacaccaatattgaataccataagggg
gcgcttgacccggaagcgctgaaagcatcgattcgtgatgcgcactttgtggggattcga
tcgcgtacgcaactgacggaagagattttcgccgctgccgagaaactggtggccgtcggt
tgcttctgcatcggtaccaatcaggttgaactgtcggcagcgaccaagcgcggcattccg
gtcttcaacgcacctttttccaatacccgttccgtggccgaactggtgatcggcgagttg
ctgctgctgctgcgcggcattccggccgccaatgccaaagctcaccgtggtatctggcac
aaacaggccgttggctgttttgaagcgcgcggcaagaaactgggcattattggttacggc
cacatcggtactcaactgggtattctggccgaaagcctggggatgcacgtttatttctac
gatattgaaagcaaattgccgctgggcaacgctcagcaggtgcgtcatttgtccgatcta
ttgaacatgagcgatgtggtcagcctgcatgtgccggaaaccgacagtacccagaacatg
atcggcgccgacgagctggcgctgatgaagccgggctctatcctgatcaacgcgtcgcgc
ggcaccgtggtggatattccggcgttgagcaatgcgcttgccaacaagcacctctccggc
gcggctatcgacgtgttcccgcaggagcccgcggccaatagcgatccgttcctgtcgccg
ctgtgcgagttcgataacgtaatcctgacgccgcacatcggcggctccaccgaggaagcg
caggagaacattggcggagaagtcgccgggaaactggtgaaatattccgacaatggctcc
acgttgtccgccgttaacttcccggaagtgtcgttgccgacccacagtgaccgcgccagc
cgcctgctgcacattcatgaaaaccgtccgggtatcatgacgcagattaacaacatcttt
gctgcacagagcatcaacatcgcggcgcagtatctgcagaccagcccggaaatcggttat
gtggtgatcgatgtggaaaccgacggcgccgacaccgcgctgcaactgatgaaatccatc
cccggcaccattcgcgctcgtttgctgttctga
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