Dickeya dianthicola: DDI_3811
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Entry
DDI_3811 CDS
T05141
Name
(GenBank) TsaC protein (YrdC domain) required fo threonylcarbamoyladenosine t(6)A37 modification in tRNA
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddq03009
]
DDI_3811
03016 Transfer RNA biogenesis [BR:
ddq03016
]
DDI_3811
Enzymes [BR:
ddq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
DDI_3811
Ribosome biogenesis [BR:
ddq03009
]
Prokaryotic type
Other maturation factors
DDI_3811
Transfer RNA biogenesis [BR:
ddq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
DDI_3811
Prokaryotic type
DDI_3811
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
DUF3433
Ig_Tag1-like_1st
Motif
Other DBs
NCBI-ProteinID:
ATO34979
LinkDB
All DBs
Position
complement(3938253..3938798)
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AA seq
181 aa
AA seq
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MAPLLQQLREDNVIAYPTEAVFGLGCDPDSETAVERLLALKQRPREKGLILIAADFQQLE
PYVEMSALSDMQRQTIFASWPGPVTWVLPAKTVTPDWLTGRFTSLAVRVSAHPLVKQLCL
AFGKPLVSTSANLSGQPPCRTVREVAKQFGERFPVLNGEVGGRLNPSEIRDALTGEMLRQ
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttggcaccgctgttacagcaactgcgggaagataatgtgatcgcctacccaacggaggct
gtgtttgggctggggtgtgatcctgatagtgaaacggcggtagagcgtttgttggcgttg
aagcaacgtccacgtgaaaaagggctgatcctgattgcggcggattttcagcaactggag
ccttatgtcgaaatgtctgccttgtcggacatgcaacgtcagaccatctttgcctcctgg
ccagggccggttacctgggtgctcccggccaaaacggtgacgccggattggctgaccgga
cggttcacttcactggcggtgcgagttagcgctcacccactggtgaaacagctgtgcctg
gcattcgggaagccgctggtttctaccagtgctaatctgagcggccagccgccgtgtcgt
accgtcagagaagtggcgaagcagtttggcgagcgtttccctgtcctgaatggcgaggtt
ggtggtcgtttgaatccatcggaaattcgtgatgccctgacgggagaaatgttgcgtcag
gggtag
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