KEGG   Dickeya dianthicola: DDI_3856
Entry
DDI_3856          CDS       T05141                                 
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine synthas TusD
  KO
K07235  tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
Organism
ddq  Dickeya dianthicola
Pathway
ddq04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    DDI_3856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ddq03016]
    DDI_3856
Transfer RNA biogenesis [BR:ddq03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    DDI_3856
SSDB
Motif
Pfam: DsrE DUF4587
Other DBs
NCBI-ProteinID: ATO35024
LinkDB
Position
complement(3966726..3967115)
AA seq 129 aa
MLRYCLLVTGPAYGTQQASSAFQFAQALLAQAYRLQSVFFYREGVLNANQLTAPASDEFD
LVRAWQQLAQTHQVALNVCVAAALRRGVTDAPQAEQLQLAGMNLQPGFTLSGLGELSQSV
LRCDRVVQF
NT seq 390 nt   +upstreamnt  +downstreamnt
atgctacgttactgcctgctggtgaccgggcccgcctatggcacgcagcaggccagcagc
gcgtttcagttcgcgcaggctttgctggcgcaagcgtatcggctgcagagcgttttcttc
taccgcgaaggggtgctgaacgccaaccagcttaccgcgccggccagcgacgagtttgat
ttggtccgggcctggcagcaattggcgcagacccatcaggtggcgctcaatgtgtgcgtg
gcggcggcgctgcggcgcggcgtgaccgacgcgccgcaggcggaacaattacagttggcg
gggatgaatctccagccggggtttaccctgagcggattaggcgaactgtcgcagtcggta
ttgcgctgcgatcgcgtcgttcagttttag

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