Dickeya dianthicola: DDI_3906
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Entry
DDI_3906 CDS
T05141
Name
(GenBank) Ribulose-phosphate 3-epimerase
KO
K01783
ribulose-phosphate 3-epimerase [EC:
5.1.3.1
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00030
Pentose phosphate pathway
ddq00040
Pentose and glucuronate interconversions
ddq00710
Carbon fixation by Calvin cycle
ddq01100
Metabolic pathways
ddq01110
Biosynthesis of secondary metabolites
ddq01120
Microbial metabolism in diverse environments
ddq01200
Carbon metabolism
ddq01230
Biosynthesis of amino acids
Module
ddq_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
ddq_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
DDI_3906
00040 Pentose and glucuronate interconversions
DDI_3906
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
DDI_3906
Enzymes [BR:
ddq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.1 ribulose-phosphate 3-epimerase
DDI_3906
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Motif
Pfam:
Ribul_P_3_epim
QRPTase_C
OMPdecase
FMN_dh
His_biosynth
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
ATO35074
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Position
complement(4014042..4014719)
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AA seq
225 aa
AA seq
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MKPFLIAPSILSADFARLGEDTAHVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNYG
ITAPVDVHLMVKPVDRLIPDFADAGASFITFHPEASEHVDRTLQLIKDHGCKAGLVFNPA
TSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDESGYDIRLEVDGGV
KVENIAQIAAAGADMFVAGSAIFGQPDYRAVIERMRQELEAVRHD
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtttttaatcgccccgtctattttgtcggctgactttgcccgtcttggcgag
gacacggcgcacgtcctggcggccggggcggatgtggtccactttgacgtgatggacaat
cactatgttcctaatctgactatcggtccgctggtgctgaaatctctgcgcaattatggc
attaccgcaccggtggatgtgcatctgatggtaaaaccggtggatcggctaatccccgat
tttgccgacgccggcgccagtttcatcacgtttcatcctgaagcgtccgagcatgtcgac
cgcaccctgcaattgatcaaggatcacggctgtaaggccggtctggtgtttaaccccgcc
acttcgctgagttatctcgattatgtgatggataagctggacatcattctgctgatgtcc
gtcaatccgggctttggcggccagtctttcattccgtccacgctggataaactgcgtcag
gtacgccagcggattgatgaaagcggctacgatattcgcctggaagtggatggcggcgtt
aaagtcgagaacatcgcgcagattgcggctgccggggcggacatgtttgtcgccggttcg
gcgattttcggccagccggattatcgggcggtgattgaacgtatgcgacaggaactggag
gcggtacgtcatgactga
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