Dickeya dianthicola: DDI_3943
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Entry
DDI_3943 CDS
T05141
Name
(GenBank) 1,4-alpha-glucan (glycogen) branching enzyme GH-13-type
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00500
Starch and sucrose metabolism
ddq01100
Metabolic pathways
ddq01110
Biosynthesis of secondary metabolites
Module
ddq_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
DDI_3943
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddq04147
]
DDI_3943
Enzymes [BR:
ddq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
DDI_3943
Exosome [BR:
ddq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DDI_3943
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgB_N
CBM_48
Alpha-amylase_C
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
ATO35111
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Position
complement(4060968..4063151)
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AA seq
727 aa
AA seq
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MSGFSDQNIINLLFSGHYADPFAVLGMHETASGLEVRALLPDASDVWVVDAHSGRNVANL
QCRDPRGFFASVIPRRKKPFSYRLAVTWQQDTQFIDDPYRFGTLLQELDIWLLAEGRHLR
PFETLGAHPATLDDVVGTCFAVWAPNAQRVSVVGDFNFWDGRRHPMRLRRENGVWELFVP
GVGPGQLYKFEIIDCYGNVLVKSDPYAFESQMRPDTASVVSHLPPVLPVDEARQRANDLQ
SPISIYEVHLGSWRRHTDNHFWLSYRELADQLVPYVKEMGFTHVELMPVHEHPFDGSWGY
QPLGLYAPTRRFGTPDDFRYLVSAFHEAGINVLLDWVSGHFPADSYGLARFDGTALYEYA
DPKEGYHQDWNTLIYNFDRHEVRNYLAGNALYWAERFGVDGLRVDAVASMIYRDYSRRDG
EWVPNYYGGKENLEAIGFLRYTNQMLGQHHAGAVTIAEESTDYAGVTLPPEHGGLGFHYK
WNMGWMHDSLAYMQLDPVHRKYHHDLLTFGMLYAYSENFVLPLSHDEVVHGKRSLLDRMP
GDVWQKFANLRAYYGFMWAYPGKKLLFMGSEFAQGREWNHDTSLDWHLLDEPEGWHAGIQ
QLVRDLNHCYRQHPPLYQCDYLHQGFEWVVVDDRENSVFAFIRRDADGNEMLIISNFTPV
PREAYRVGINQPGPWREVLNTDSWHYHGGNLGNKGLVYSEAVGSHSRPQSLVLALPPLAT
LYLMKEA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggttttctgatcagaacattattaatctccttttttccggccattacgccgat
ccttttgccgtgctgggtatgcatgaaacggcatcggggctggaagtccgggccttgctt
cccgatgccagcgacgtatgggtcgtggacgcacacagcggacgtaacgttgcgaacctg
caatgccgggacccgcgcggttttttcgcctcggtgattccccgccgcaaaaagccgttc
agctatcggctggcggtgacctggcagcaggatacgcagttcattgatgatccttaccgt
tttggcaccttgctgcaggagctggatatctggctgctggcggaagggcgtcatttgcgg
ccgtttgaaacgctgggcgcgcatccggccacgctggatgacgtcgtcggcacctgtttt
gccgtctgggcgccgaatgctcagcgggtgtcggtggtgggcgatttcaatttctgggac
ggtcgccgccacccaatgcggctacggcgtgaaaacggcgtgtgggaactgttcgtgccg
ggcgtcgggccgggccagctgtacaagttcgaaatcatcgattgttacggcaatgtgctg
gtgaagtccgacccttacgccttcgaatcccagatgcggccggataccgcgtcggtggtc
agtcatctgccgcccgtgctgccggtggatgaagcgcggcagcgcgccaacgatctacag
tcgccgatttccatttacgaggtacatctggggtcatggcggcggcacaccgacaaccat
ttctggctcagttaccgcgaactggcggaccaactggtgccgtacgtgaaagaaatgggg
tttacccatgtcgaactgatgccggtgcatgagcacccgtttgacggcagctggggctat
cagccgctggggttatacgcgccgacccgccgtttcggcacgccggacgatttccgttat
ctggtgtcggcctttcacgaggcgggcatcaatgtgctgctggattgggtttccggccat
ttcccggcggacagctacgggctggcgcgtttcgacggcaccgcgctgtacgaatacgcc
gacccgaaagaaggctaccaccaggactggaacacgctgatttacaactttgatcgccac
gaggtgcgcaattatctggcgggcaacgcgctgtactgggctgaacgctttggcgtcgac
gggctgcgggtagacgcggtggcgtcgatgatttaccgcgattacagccgccgcgacggg
gaatgggtgccgaactactacggcggcaaggagaacctggaggcgatcggcttcctgcgt
tacaccaaccagatgctggggcagcatcatgccggcgcggtcaccatcgccgaagagtcc
accgattacgccggggtgacgctgccgccggagcatggcgggctggggtttcactacaaa
tggaatatgggctggatgcatgactcgctggcctatatgcaactggacccggtgcatcgt
aaatatcaccacgacctgctgaccttcggcatgttgtacgcctatagcgaaaactttgtg
ctgccgctgtcgcatgacgaggtggtgcatggcaaacgctcgctgctggatagaatgccc
ggcgacgtctggcagaagtttgccaacctgcgtgcttattacggcttcatgtgggcgtac
cccggcaagaagctgctgttcatgggcagtgaattcgcccaggggcgggagtggaaccat
gacaccagtctggactggcatctgctggacgagccggaaggctggcacgccgggatacag
caactggtgcgcgacctcaaccactgctatcgccagcacccgccgctctatcagtgcgac
tacctgcatcagggctttgagtgggtggtggtggacgaccgggaaaactcggtgttcgcc
tttatccggcgcgatgccgacggcaacgaaatgctgattatcagcaactttacgccggtg
cctcgggaagcgtatcgcgtcggcatcaatcagccggggccgtggcgcgaggtgctcaat
accgattcctggcattaccacggcggtaacctgggcaataaagggctggtgtatagcgaa
gcggtgggcagccattcccggccgcagtcgctggtgctggcgctgccgccgctcgccacc
ttgtatctgatgaaggaggcgtga
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