Dickeya dianthicola: DDI_3953
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Entry
DDI_3953 CDS
T05141
Name
(GenBank) Gluconate utilization system Gnt-transcriptional repressor
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddq03000
]
DDI_3953
Transcription factors [BR:
ddq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DDI_3953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
H2TH_5
HTH_IclR
HTH_23
HTH_7
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ATO35121
LinkDB
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Position
complement(4070699..4071697)
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AA seq
332 aa
AA seq
DB search
MIKKKRPGLQDVADRVGVTKMTVSRYLRNPEQVSAALRGKIAAVLDELGYIPNRTPHILA
NSTSRAIGVLLPSLTNQVFAEVLRGIEKVAEAQGYQTMLAHYGYQPEMEERRLMSLLAYN
IDGLILAERTHTARTCQMIAVAGIPVVELMDSVSPCLDMAVGFDNVDAARQMTRYMIARG
RRHVVYLGARQDERTLLKRRGYEQAMAEAGLASYSVMSESPSSYTLGGELLRRAQAEYPQ
VDSLFCTNDDLAIGAMFECQRQGVRVPEQMGIAGFHGHDIGQTTVPRLTSVLTPRKRIGE
VGAAQLLARLHGEALPTASVDVGFTLQVGESV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaaaaaaaggccgggacttcaggatgtcgccgaccgggtcggggtgaccaaa
atgacggtcagccgctatttgcgcaaccccgagcaggtgtccgcggcgctgagaggcaaa
atcgccgccgtactggatgaattggggtacattcccaaccggacgccgcacattctcgcc
aattccaccagtcgggcgatcggcgtgctgttgccgtcgctcaccaaccaggtgttcgcc
gaggtgttgcgcggcatcgaaaaagtggcggaagcgcagggatatcaaaccatgctggcg
cattacggttatcagccggaaatggaggaacggcggttgatgtcgctgctggcctacaac
atcgacgggctgatcctcgcagagcgtactcacaccgcccgtacctgccagatgatcgcg
gtggccgggatcccggtggtggaattaatggattccgtgtcgccctgtcttgatatggcg
gtggggttcgataacgtggacgccgcgcgccagatgacgcgctatatgatcgcgcgtggt
cgccgccatgtggtgtatctcggcgcgcgtcaggatgagcgtacgctattaaagcggcgg
ggttacgaacaggcgatggcggaggctgggctggccagctacagcgtgatgagcgaaagc
ccgtcgtcctatacgctcggcggcgaactgctgcgccgggcgcaggcggaatacccgcag
gtggacagcctgttctgcaccaacgatgacctggctatcggcgccatgttcgagtgccag
cggcaaggggtgcgcgttcccgaacagatgggcatcgccggtttccacggccacgatatc
ggccagaccacggtgcctcggctgaccagcgtgctgacgccgcgtaagcgcattggtgaa
gtcggcgctgcacagctgctggcgcgtctgcatggggaagcgttgccgacggccagcgtg
gacgtcggctttaccctacaagtgggagagagcgtctag
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